FastQCFastQC Report
Fri 29 Sept 2023
SRR12925984_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925984_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10406619
Total Bases390.6 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN907478387.20202978508198No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC853210.8198724292683338No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC632660.607940004337624No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG553400.5317769392729762No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG427550.4108442905423942No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC313430.30118331419647437No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC298420.28675980162240977No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC198940.19116679490235974No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG145220.13954580253202312No Hit
GCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG107980.10376088525966022No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)