FastQCFastQC Report
Fri 29 Sept 2023
SRR12925985_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925985_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10380733
Total Bases389.3 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN905364187.21581607002126No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC876170.8440348094879235No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC635330.6120280716207613No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG564810.5440945258875264No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG431600.41577025437413717No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC310600.29920815803662415No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC306870.29561496283547606No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC200670.19331004852932834No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCG143040.13779373768692443No Hit
GCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG108910.10491551993486394No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)