FastQCFastQC Report
Fri 29 Sept 2023
SRR12925986_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925986_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10553379
Total Bases391.7 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN930029988.12626742581688No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC921910.8735685508878247No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC864540.8192068151821327No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG446100.42270821506552547No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG399400.378456985198769No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC312600.29620844660274215No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC214960.20368831632029896No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC170330.1613985435375722No Hit
GCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG159140.1507953045181074No Hit
TGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG141630.13420346222759555No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG130020.12320224640847259No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG130000.12318329513229839No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)