FastQCFastQC Report
Fri 29 Sept 2023
SRR12925987_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925987_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10122310
Total Bases375.8 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN891720688.09457525011584No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC889600.8788507761568259No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC831810.8217590648774834No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG431740.426523194804348No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG384670.3800219515110681No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC304280.30060332078349705No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC205280.20279955859877832No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC160500.15856064475401366No Hit
GCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG151670.14983733950056854No Hit
TGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG134280.13265746652690938No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG124060.12256095693571921No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG123620.12212627354823158No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA120540.1190834898358181No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)