FastQCFastQC Report
Fri 29 Sept 2023
SRR12925989_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925989_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10656911
Total Bases395.3 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC56

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN939830188.18972965055258No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC950800.8921909923053688No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC874300.8204065887385191No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG463510.4349384169577845No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG397690.3731756791437969No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC316680.29715928002026104No Hit
GTGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC214510.20128722103431285No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC169340.1589015803922919No Hit
GCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG158820.14903005195407937No Hit
TGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG144100.1352174190063143No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCG130030.12201471889931331No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCG129750.12175197859867648No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)