FastQCFastQC Report
Fri 29 Sept 2023
SRR12925990_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925990_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7348614
Total Bases276.7 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN658713389.63776026336396No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC494950.6735283687508965No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC298760.4065528547287965No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG167200.22752589808091706No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG124520.1694469188339461No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC91950.12512563593624593No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC74410.10125718945096314No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)