FastQCFastQC Report
Fri 29 Sept 2023
SRR12925992_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925992_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7471855
Total Bases281.6 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN669662489.62465144197793No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC491280.6575074061260556No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC302610.4049998293596436No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG168810.22592783184363185No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG125030.1673346177087216No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC93980.125778672096822No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)