FastQCFastQC Report
Fri 29 Sept 2023
SRR12925993_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12925993_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7426701
Total Bases279.7 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN665777589.6464661765702No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC496520.6685606435481919No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGC308430.415298798214712No Hit
CGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG166200.22378711624448056No Hit
TGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCG129290.17408806413507155No Hit
CCAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC93860.126381821484398No Hit
CTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC74630.10048876344961241No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)