FastQCFastQC Report
Wed 6 Sept 2023
SRR12998993_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR12998993_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28175991
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length24-49
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTGGAATGAACCGAGCATAAATCCTTCGGTAATTCCCGAT337650.11983606894252628No Hit
TTTGGAATGAACCGAGCATAAATCCTTCGGTAATTCTCGAT316380.11228708867773275No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)