FastQCFastQC Report
Sat 23 Sept 2023
SRR13362467_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13362467_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences400176062
Total Bases30.4 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGCCGTC33297410.8320690106646109TruSeq Adapter, Index 3 (100% over 50bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7677560.1918545542586703No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)