FastQCFastQC Report
Fri 22 Sept 2023
SRR13577575_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13577575_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences225819564
Total Bases33.8 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAA96944474.2930058088324No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAA34053861.508011945324631No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAACAAAAAA33462381.481819352020359No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAACAAAAA30283381.341043241054172No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAACAAAAAAA26867171.1897627257840246No Hit
CCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAAA22230410.9844324205674225No Hit
CCCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAACAAAAAAA21420750.9485781311667043No Hit
CCCCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAAAA20701810.9167412084809445No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAACAAA19396640.8589441789906209No Hit
CCCCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAACAAAAAAAA18397890.8147163901175543No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAA17933890.7941690118576263No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA15250100.675322356038204No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAACAAAAA11819920.5234232052631188No Hit
GGGGGGCCGCCGGTGAAATACCACTACTCTCAAAAAAAAAACAAAAAAAA10101330.4473186388757707No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAA9271760.4105826721018733No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAACAAAAAA9186730.406817276469456No Hit
CCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAACAAAAAA9144480.40494631368608963No Hit
CCCCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAACAAAAAA8930160.3954555505208574No Hit
CCCCGCGACCTCAGATCAGACGTGGCGACCCGCTGAAAAAAAAAACAAAA8668100.3838507101182783No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAACAAA8376450.37093553152020076No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAACAAAAAAA7395890.3275132530146945No Hit
GGGGCAGTTAAAAAGCTCGTAGTTGGATCTTGAAAAAAAAAACAAAAAAA6307170.27930130978377055No Hit
GGGCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAACAAAAAA6119550.2709929065313402No Hit
GGGGGGACCGGGGTCCGGTGCGGAGAGCCGTAAAAAAAAAACAAAAAAAA6095030.26990708386984574No Hit
CCCCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAACAAAAAAA5867330.25982381225392853No Hit
CCCCTTTCGCCGAATCCCGGGGCCGAGGAAGAAAAAAAAAACAAAAAAAA5731580.2538123756186156No Hit
CCCCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAACAAAA5642520.24986851892070785No Hit
CCCCCGTGGCGCAATGAAGGTGAAGGGCAAAAAAAAAACAAAAAAAAAAG5599250.24795238733168398No Hit
GGGGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAACAAAAA5559340.24618504710247338No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAACAAAAA5475480.2424714627471338No Hit
CCCCGGGACCGGGGTCCGGTGCGGAGAGCCGTAAAAAAAAAACAAAAAAA5410870.23961032889072445No Hit
CCCCTAAACCATTCGTAGACGACCTGCTTAAAAAAAAAACAAAAAAAAAA5321480.23565185875569222No Hit
CCCCCGCCTGGGAATACCGGGTGCTGTAGGCTTAAAAAAAAAACAAAAAA5141390.22767690756855768No Hit
GGGCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAACAAAAAAA5134050.2273518693003942No Hit
CCCCTTTCGCCGAATCCCGGGGCCGAGGAAAAAAAAAACAAAAAAAAAAG4852950.2149038778588732No Hit
GGGGACGTACGCAGTTTTATCCGGTAAAGCAAAAAAAAAACAAAAAAAAA4815850.21326097326093502No Hit
GGGGCAGTTAAAAAGCTCGTAGTTGGATCTTAAAAAAAAAACAAAAAAAA4573290.20251965414298648No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTGAAAAAAAAAACAAAA4513320.1998639940691764No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAACAAAAAA4436820.1964763336448564No Hit
GGGCGCCGAGGGCGCACCACCGGCCCGTCTCAAAAAAAAAACAAAAAAAA4384920.19417803853345494No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCTAAAAAAAAAACAAAAAA4303800.1905857899893917No Hit
CCCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAACAAAAAA4174980.18488123553369362No Hit
CCCCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAACAAA4136330.18316969206441297No Hit
GGGGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAACAA4025390.17825692020200695No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAGAAAAAAAAAACAAA4005290.1773668290316954No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAACAAAA3994720.17689875621228285No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAGAAAAAAAAAACAA3872720.17149621279049143No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGACATAAAAAAAAAACAAA3729090.16513582498990212No Hit
GGGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAACAAAAAAAA3601990.15950743753982272No Hit
GGGCAACTTCTTAGAGGGACAAGTGGCGTAAAAAAAAAACAAAAAAAAAA3542750.15688410416025778No Hit
CCCCAACTTCTTAGAGGGACAAGTGGCGTAAAAAAAAAACAAAAAAAAAA3501210.15504458240828062No Hit
GGGGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAACAAAA3475980.15392731871539703No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAACAAAAA3385940.1499400645375438No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAACAAAAAA3328710.14740574027501002No Hit
GGGGGGCCGCCGGTGAAATACCACTACTCTCATAAAAAAAAAACAAAAAA3264200.1445490347328808No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAA3207590.142042166018884No Hit
CCCCGCGACCTCAGATCAGACGTGGCGACCCGCTAAAAAAAAAACAAAAA3163530.1400910507470469No Hit
CCCCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAAAA3161720.14001089825857604No Hit
CCCCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA3051150.13511451115900658No Hit
GGGCAACTTCTTAGAGGGACAAGTGGCGTTAAAAAAAAAACAAAAAAAAA3014370.13348577716676488No Hit
GGGGGCCGCCGGTGAAATACCACTACTCTCAAAAAAAAAACAAAAAAAAA2945990.1304576958619936No Hit
CCCCGCCGAGGGCGCACCACCGGCCCGTCTCTAAAAAAAAAACAAAAAAA2942940.13032263227644883No Hit
CCCCAACTTCTTAGAGGGACAAGTGGCGTTAAAAAAAAAACAAAAAAAAA2919010.12926293666920727No Hit
CCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAACAAAAAA2915310.12909908904084147No Hit
GGGCGGGACCGGGGTCCGGTGCGGAGAGCCGTAAAAAAAAAACAAAAAAA2908200.12878423589552232No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTAAAAAAAAAACAAAAAAAAA2812470.12454501063512814No Hit
GGGGATCGAGGCCAAAAAAAAAACAAAAAAAAAAGATCGGAAGAGCACAC2783650.12326877045958694No Hit
GGGGGGACCGGGGTCCGGTGCGGAGAGCCGCAAAAAAAAAACAAAAAAAA2657650.11768909446658928No Hit
CCCCGGGACCGGGGTCCGGTGCGGAGAGCCGAAAAAAAAAACAAAAAAAA2647000.11721747899575256No Hit
CCCCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAACAAAAAA2594350.11488597152724996No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA2583570.11440859924784905No Hit
CCCCGGGACCGGGGTCCGGTGCGGAGAGCCAAAAAAAAAACAAAAAAAAA2461550.10900517016320163No Hit
CCCCTGGGTCGGGGTTTCGTACGTAGCAGAGCAGCTAAAAAAAAAACAAA2372280.10505201400530559No Hit
GGGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAACAAAAAAAAA2329570.10316068097625057No Hit
GGGCGGGACCGGGGTCCGGTGCGGAGAGCCGAAAAAAAAAACAAAAAAAA2301970.10193846623492728No Hit
CCCCGCTGCGATCTATTGAAAGTCAGCCCTCGAAAAAAAAAACAAAAAAA2265260.10031283206268168No Hit
GGGCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAACAAAAAA2262070.10017156883714469No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)