FastQCFastQC Report
Wed 6 Sept 2023
SRR13762825_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762825_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18470046
Total Bases852.2 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT3978922.154255598497156No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGCTGTAGGCACCATCAAT3216511.7414737353659No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT2431891.3166669969311393No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT1934721.0474906234667742No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT1609940.8716491556111988No Hit
ATTGATCATCGACACTTCGAACGCACCTGTAGGCACCATCAAT1521530.8237824637794622No Hit
ACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT1398070.7569391002058143No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT1372570.7431329624192599No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT1255470.6797330120347291No Hit
ATTGATCATCGACACTTCGAACGCACTGTAGGCACCATCAAT1146300.6206264997932327No Hit
ACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT1070380.5795221083910673No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT1027050.5560625024972867No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAA1009910.5467826122360496No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAAT993660.5379845832544218No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT974690.5277138995755614No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT944500.5113685152706171No Hit
TCGACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT933080.505185531210913No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA828910.44878610480991765No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT766780.4151478561558537No Hit
CGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT727920.3941083850034808No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT726670.39343161354335554No Hit
AACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT706850.38270072527161003No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTCTGTAGGCACCATCAAT689690.373410006667011No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT678170.367172880890497No Hit
AGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT677690.3669130006498089No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT651300.35262500158364524No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT622720.33715129891934215No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT597480.3234859295964937No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT596770.3231015234071426No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT588160.31843992158980006No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT575230.3114393976062647No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT574100.31082759620631156No Hit
TCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATC567080.3070268476862483No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT564930.3058628007748329No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT555070.3005244274973652No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT517860.28037829467235764No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT516700.27975025075736143No Hit
AGCGAGCGCACGGGGTCGGCGGCGACTGTAGGCACCATCAAT502160.2718780451331848No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT493810.26735721177954835No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT468020.2533940630142448No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT455860.24681043025014665No Hit
ATTGATCATCGACACTTCGAACGCACTCTGTAGGCACCATCAAT449470.2433507745459865No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT448260.24269565977258528No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT415230.22481265071023646No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCCTGTAGGCACCATCAAT405500.21954466166462175No Hit
TTCGCTTCTGGCGCCAAGCGCCCGGCCGCTGTAGGCACCATCAAT383640.20770928236995187No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT383120.20742774544253978No Hit
TGACCGGGGTCCGGTGCGGAGTGCCCTTCCTGTAGGCACCATCAAT380950.2062528701877624No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT375420.20325883324816843No Hit
GCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATC374810.2029285687756273No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT372390.20161833922882488No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT359050.1943958342063685No Hit
TATTGATCATCGACACTTCGAACGCACCTGTAGGCACCATCAAT351980.19056801482790026No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAACTGTAGGCACCATCAAT344610.18657777029900197No Hit
ACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCA326650.17685391795992278No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT323740.17527839400075126No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT323450.17512138302200222No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT317720.17201906264878822No Hit
AGTCAGAATCCCGCCCAGGCGGAACGATACCTGTAGGCACCATCAAT307080.16625838398020232No Hit
TCGGGTGTTGACGCGATGTGATTTCTGCCCACTGTAGGCACCATCAAT300800.1628582841645332No Hit
GCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTCTGTAGGCACCAT300310.16259298975216413No Hit
AGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTCTGTAGGCACCA297820.1612448610035947No Hit
CCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCAT295370.15991838894174926No Hit
TTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT291400.15776896278439154No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT291220.15767150769413352No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATACTGTAGGCACCATCAAT290800.15744411248353143No Hit
ATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATCAA288940.1564370765508651No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG288470.15618261048185803No Hit
CAGTGCGGTAACGCGACCGATCCCGGACTGTAGGCACCATCAAT285400.1545204597757905No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT278930.15101749069818235No Hit
GTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT273780.14822919228246642No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA271540.14701641782592204No Hit
CGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT268710.14548420724019853No Hit
TATTGATCATCGACACTTCGAACGCACTGTAGGCACCATCAAT267500.14482909246679732No Hit
TCTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAAT265610.14380581401908799No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGCTGTAGGCACCATCAAT265100.1435296912633569No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT264590.1432535685076258No Hit
CATTGATCATCGACACTTCGAACGCACTGTAGGCACCATCAAT262550.14214907748470146No Hit
TGTCCGGTGCGGAGTGCCCTTCGTCCTGGGACTGTAGGCACCATCAAT260020.140779292049408No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT257660.13950154753269156No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAAT257540.13943657747251956No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTGCTGTAGGCACCATCAAT257170.1392362531203225No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT246340.13337270518979757No Hit
TTGCCAAGAATGTTTTCATTAATCAAGAACGACTGTAGGCACCATCAAT245260.13278797464824937No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCTGTAGGCACCATCAAT244280.1322573858235112No Hit
TGCACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT244010.13211120318812417No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT243670.13192712135097012No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCTGTAGGCACCATCAAT242050.13105002553864784No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT239890.12988056445555143No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT238690.12923086385383123No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT238510.12913340876357318No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCCTGTAGGCACCATCAAT235800.1276661682380217No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT235770.1276499257229787No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT235560.12753622811767767No Hit
TAGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT232330.1257874506647141No Hit
TGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT229830.12443390774446365No Hit
TCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT229610.12431479596748161No Hit
AGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT224240.12140738577478367No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT222790.12062233088103841No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGTTCTGTAGGCACCATCAAT213500.11559256538938778No Hit
ACCGGGGTCCGGTGCGGAGTGCCCTTCCTGTAGGCACCATCAAT212110.11483999552572852No Hit
CTAAACCATTCGTAGACGACCTGCTTCCTGTAGGCACCATCAAT212020.11479126798059949No Hit
TCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT204340.11063318412959015No Hit
TTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT199040.1077636731386592No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT198770.10761749050327216No Hit
TCGACTGCATAATTTGTGGTAGTGGGCTGTAGGCACCATCAAT197570.10696778990155195No Hit
TAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT196610.10644802942017578No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT195770.10599323899897163No Hit
CGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT193810.10493206134949529No Hit
TTAAAACAAAGCATCGCGAAGGCCCGCCTGTAGGCACCATCAAT193510.10476963619906524No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT192570.10426070406105106No Hit
TGAAGGGCAGGGCGCCCTGGAATGGGTTCTGTAGGCACCATCAAT188120.10185139766300529No Hit
AGCTACCATCTGTGGGATTATGACTGAACCTGTAGGCACCATCAAT187170.1013370513533101No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTTCTGTAGGCACCATCAAT185290.10031918707728178No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)