FastQCFastQC Report
Wed 6 Sept 2023
SRR13762828_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762828_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18434667
Total Bases852.7 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT3971062.154126244862465No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGCTGTAGGCACCATCAAT3189591.7302129731988107No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT2435811.3213203146007464No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT1932751.0484322825033943No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT1583090.8587570364032071No Hit
ATTGATCATCGACACTTCGAACGCACCTGTAGGCACCATCAAT1517610.8232370023282763No Hit
ACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT1397330.7579903667367575No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT1392240.7552292645155998No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT1224290.6641237403420415No Hit
ATTGATCATCGACACTTCGAACGCACTGTAGGCACCATCAAT1142270.6196314801889288No Hit
ACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT1052590.5709840052982784No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT1031760.5596846419845827No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAA1007030.5462696993658741No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAAT988160.5360335502670052No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT955970.5185718841571697No Hit
TCGACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT938770.5092416369658318No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT922980.5006762530616907No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA836110.45355308018311374No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG811560.44023577968617494No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT773310.41948682881008914No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT743470.40329993484558196No Hit
CGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT724950.393253645427932No Hit
AACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT682100.3700093958843954No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT675290.36631526894410404No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTCTGTAGGCACCATCAAT674460.3658650302714988No Hit
AGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT663690.3600227766522715No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT646880.35090408739143486No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT612630.33232496144356716No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT597700.324226089898993No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT592160.32122088237341095No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT584920.3172934992533361No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT577670.31336069157094076No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT570580.30951467688567413No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT567770.3079903748736009No Hit
TCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATC566250.30716584140087805No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT554550.30081910348584No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT514780.27924561913703133No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT506190.27458592010368293No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT498390.27035476149365756No Hit
AGCGAGCGCACGGGGTCGGCGGCGACTGTAGGCACCATCAAT489100.26531534309787097No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT470220.2550737694366814No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT456880.247837403301074No Hit
ATTGATCATCGACACTTCGAACGCACTCTGTAGGCACCATCAAT446930.24243996379213142No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT439370.23833899467779915No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT415420.22534716792009316No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCCTGTAGGCACCATCAAT406440.22047591095624347No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT388470.21072797246622357No Hit
TTCGCTTCTGGCGCCAAGCGCCCGGCCGCTGTAGGCACCATCAAT382460.2074678105115758No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT378010.20505388027893318No Hit
TGACCGGGGTCCGGTGCGGAGTGCCCTTCCTGTAGGCACCATCAAT375950.20393642044090085No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT369420.20039418124558472No Hit
GCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATC362760.19678142274010155No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT356070.19315239054765676No Hit
TATTGATCATCGACACTTCGAACGCACCTGTAGGCACCATCAAT355000.19257196237935842No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAACTGTAGGCACCATCAAT349560.18962100047698177No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT321230.17425321542287692No Hit
ACCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCA315890.1713564991437057No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT315520.17115579033784553No Hit
AGTCAGAATCCCGCCCAGGCGGAACGATACCTGTAGGCACCATCAAT308720.16746708795987472No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT306820.1664364211189711No Hit
TCGGGTGTTGACGCGATGTGATTTCTGCCCACTGTAGGCACCATCAAT306100.16604585263189187No Hit
GCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTCTGTAGGCACCAT291030.1578710372148301No Hit
TTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT290830.15776254596841918No Hit
AAGTCAGAATCCCGCCCAGGCGGAACGATACTGTAGGCACCATCAAT289450.1570139563681839No Hit
CCCGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCAT289170.15686206862320864No Hit
AGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTCTGTAGGCACCA287290.15584225090694614No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT286130.1552130016777629No Hit
CAGTGCGGTAACGCGACCGATCCCGGACTGTAGGCACCATCAAT285640.15494719812405616No Hit
ATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATCAA284010.15406299446580726No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA272770.14796578641751434No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT272330.14772710567541036No Hit
TCTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAAT270370.14666389146058348No Hit
TATTGATCATCGACACTTCGAACGCACTGTAGGCACCATCAAT269510.1461973791010166No Hit
GTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT269320.14609431241692622No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT266110.14435302791203117No Hit
CGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT265030.1437671751814123No Hit
CATTGATCATCGACACTTCGAACGCACTGTAGGCACCATCAAT262560.14242730828823758No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGCTGTAGGCACCATCAAT259100.14055040972532892No Hit
TGTCCGGTGCGGAGTGCCCTTCGTCCTGGGACTGTAGGCACCATCAAT258660.14031172898322494No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAAT257520.13969332887868274No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT254660.1381419040550068No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTGCTGTAGGCACCATCAAT252240.13682915997343484No Hit
TTGCCAAGAATGTTTTCATTAATCAAGAACGACTGTAGGCACCATCAAT249990.13560863345131213No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT246340.1336286682043131No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT244280.13251120836628077No Hit
TGCACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT241500.13100318004116918No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT241430.13096520810492535No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT240940.13069940455121865No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT240330.13036850624966537No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCTGTAGGCACCATCAAT237750.1289689691709647No Hit
TCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT235990.1280142462025487No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCCTGTAGGCACCATCAAT235220.1275965549038667No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCTGTAGGCACCATCAAT233290.12654961437600148No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT232260.1259908844569853No Hit
TAGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT229180.12432011926225735No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT227720.12352813316345775No Hit
TGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT226180.12269275056609377No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT222490.12069108706981255No Hit
AGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT221370.12008353608991147No Hit
CTAAACCATTCGTAGACGACCTGCTTCCTGTAGGCACCATCAAT213000.11554317742761505No Hit
ACCGGGGTCCGGTGCGGAGTGCCCTTCCTGTAGGCACCATCAAT207900.11277665064413694No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGTTCTGTAGGCACCATCAAT207760.1127007067716493No Hit
TCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT205720.11159409605825807No Hit
TCGACTGCATAATTTGTGGTAGTGGGCTGTAGGCACCATCAAT203460.11036814497381482No Hit
TTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT202850.11003724667226157No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT199500.10822001829487889No Hit
CGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT195770.10619665654931548No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT195080.10582236174919786No Hit
TTAAAACAAAGCATCGCGAAGGCCCGCCTGTAGGCACCATCAAT194390.10544806694908022No Hit
TAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT193390.10490561071702571No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT193170.1047862703459737No Hit
AGCTACCATCTGTGGGATTATGACTGAACCTGTAGGCACCATCAAT189100.10257847348151176No Hit
TGAAGGGCAGGGCGCCCTGGAATGGGTTCTGTAGGCACCATCAAT186510.10117351184049052No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAATCTGTAGGCACCATCAAT185000.1003544029300882No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTTCTGTAGGCACCATCAAT184700.10019166606047183No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)