FastQCFastQC Report
Wed 6 Sept 2023
SRR13762830_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762830_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16166589
Total Bases748.4 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT4028032.49157691829736No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT3143631.9445227437896764No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGCTGTAGGCACCATCAAT2258251.396862380802778No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT2216861.3712601959510444No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT2024381.252199830155885No Hit
TCGACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT1556600.9628499864751927No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT1398930.8653216828856105No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT1154300.7140034301608088No Hit
ACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT916140.5666872585181698No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT805710.49837971386542956No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT802390.49632609575217135No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT801500.4957755776434967No Hit
ACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT793900.491074524131219No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAA764650.4729816537056766No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT764090.47263526028898245No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT703040.4348721922725938No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA694880.429824745343622No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT684910.42365770540712083No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT684330.4232989407969733No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT662360.4097091847884548No Hit
AGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT660870.40878753087617925No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT644170.3984575843426217No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT618420.38252967277141764No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT565880.35003054756943475No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT549970.34018926317728493No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT546070.3377768804538793No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT512810.31720358574093765No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT497470.30771488036220873No Hit
AACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT489470.3027664029808638No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT486890.30117051902538006No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT470370.29095191323290276No Hit
AGCGAGCGCACGGGGTCGGCGGCGACTGTAGGCACCATCAAT454380.28106114406693955No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT446440.27614978026595466No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT437690.27073738313010864No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT435580.26943222222077895No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAAT428960.265337357187716No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT420980.26040125099982436No Hit
TCGGGTGTTGACGCGATGTGATTTCTGCCCACTGTAGGCACCATCAAT413720.25591050777625385No Hit
TTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT402630.2490506810063644No Hit
TGTCCGGTGCGGAGTGCCCTTCGTCCTGGGACTGTAGGCACCATCAAT377140.23328359495005407No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAACTGTAGGCACCATCAAT375870.23249802416576557No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT365510.22608974595692385No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT343170.2122711228695181No Hit
ATTGATCATCGACACTTCGAACGCACCTGTAGGCACCATCAAT342820.21205462698408428No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT336510.20815151544954844No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT333300.20616593890028378No Hit
TCGGGATAAGGATTGGCTCTAAGGGCTGCTGTAGGCACCATCAAT330430.2043906726397263No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT327850.20279478868424256No Hit
TCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT327290.20244839526754843No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG319940.19790198167343775No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT318960.19729579319422297No Hit
TTGCCAAGAATGTTTTCATTAATCAAGAACGACTGTAGGCACCATCAAT307900.1904545232145136No Hit
ATTGATCATCGACACTTCGAACGCACTCTGTAGGCACCATCAAT303350.18764007670387364No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT288260.17830601124331175No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAAT287600.1778977618593508No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTTCTGTAGGCACCATCAAT286810.17740909971794297No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT282870.1749719746076306No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT278040.17198433138864358No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCTGTAGGCACCATCAAT276220.1708585527843876No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT268730.1662255408361034No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTCTGTAGGCACCATCAAT264190.16341727992219016No Hit
TCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT262920.16263170913790162No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT261840.16196366469142007No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTACTGTAGGCACCATCAAT253950.15708322887406861No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT248620.15378630581874755No Hit
TGCACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT247010.15279042474575188No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCTACTGTAGGCACCATCAAT247010.15279042474575188No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT244730.15138010869206855No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAATGCTGTAGGCACCATCAAT243120.15038422761907289No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT239380.14807081444329415No Hit
ATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATCAA232920.14407491895785807No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT232840.14402543418404462No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT232380.14374089673461732No Hit
TAGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT231100.14294914035360212No Hit
TGGGCCGCCGGTGAAATACCACTACTCTCTGTAGGCACCATCAAT226750.1402584057774958No Hit
CTAAACCATTCGTAGACGACCTGCTTCCTGTAGGCACCATCAAT225780.13965840289500772No Hit
TCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT224360.13878004815981898No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT223660.1383470563889513No Hit
ATGTGTTGTTGCCATGGTAATCCTGCTCTGTAGGCACCATCAAT221120.1367759148203743No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT220550.13642333580695346No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATCTGTAGGCACCATCAAT219960.13605838560007927No Hit
CGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT219050.13549549629795127No Hit
GTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT215710.1334295069912398No Hit
TTGCCAAGAATGTTTTCATTAATCAAGAACGCTGTAGGCACCATCAAT213150.1318459942292094No Hit
AGCTACCATCTGTGGGATTATGACTGAACCTGTAGGCACCATCAAT212000.13113465060564106No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT211260.13067691644786666No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTGCTGTAGGCACCATCAAT209960.1298727888733981No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT209720.12972433455195773No Hit
TGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT206150.12751607652053257No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGACTGTAGGCACCATCAAT205370.12703359997585142No Hit
TGACCGGGGTCCGGTGCGGAGTGCCCTTCCTGTAGGCACCATCAAT203750.12603153330612907No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT201250.12448513412445879No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAATCTGTAGGCACCATCAAT197440.12212842177159325No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT196400.12148511971201842No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCCTGTAGGCACCATCAAT195760.12108924152151081No Hit
GCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT194810.1205016098324761No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGCTGTAGGCACCATCAAT192220.11889954028026567No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCTGTAGGCACCATCAAT191860.11867685879810516No Hit
AGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT190280.11769953451528953No Hit
TCCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT189290.1170871604393481No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT188290.11646860076667997No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCTGTAGGCACCATCAAT187260.1158314843038318No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA184250.11396961968910077No Hit
TAGCCTCTGGCATGTTGGAACAATGTAGGTACTGTAGGCACCATCAAT182540.11291188264883828No Hit
AGGAACCGCAGGTTCAGACATTTGGTGTATGTCTGTAGGCACCATCAAT182450.11285621227829816No Hit
ACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT182400.11282528429466475No Hit
TCAACTTCTTAGAGGGACAAGTGGCGTCTGTAGGCACCATCAAT179100.11078403737485996No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCCTGTAGGCACCATCAAT179020.11073455260104653No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT177140.10957166041643046No Hit
ACTATGCCTGGGCAGGGCGAAGCCAGAGGCTGTAGGCACCATCAAT172420.10665205876143694No Hit
GCGGGTGTTGACGCGATGTGATTTCTGCCCACTGTAGGCACCATCAAT169580.10489534929105948No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCCTGTAGGCACCATCAAT167810.10380049867043692No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT166940.10326235175521564No Hit
TATGCTAAGACTTCACCAGTCAAAGCGACTGTAGGCACCATCAAT164730.10189533487861911No Hit
TCGACTGCATAATTTGTGGTAGTGGGCTGTAGGCACCATCAAT162720.1006520299365562No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)