FastQCFastQC Report
Wed 6 Sept 2023
SRR13762831_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762831_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16236110
Total Bases751.8 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT4038882.4875909315716633No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT3184501.961368825414462No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGCTGTAGGCACCATCAAT2247811.3844510784910917No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT2224801.3702789646042064No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT2027241.2485995721881658No Hit
TCGACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT1552980.9564975847047106No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT1422790.8763121215611375No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT1152790.7100161307111125No Hit
ACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT925650.5701180886308358No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT814870.5018874594961478No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT811810.5000027715998475No Hit
ACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT798960.49208831425754074No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT795120.4897232157210071No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAA765440.4714429749490488No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT762480.4696198781604707No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT718780.44270456408585557No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA690230.4251203028311584No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT682710.4204886515304466No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT678310.4177786427906684No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT668450.4117057595692564No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT648940.39968933445264904No Hit
AGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT644180.39675759772507085No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT615630.37917333647037377No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT569060.35049035760413055No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT558920.34424501928109624No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT542120.3338977131837614No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT519680.3200766686108926No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT499600.30770917418026855No Hit
AACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT487730.3003983096936397No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT487590.30031208214282856No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT466180.28712542597949875No Hit
AGCGAGCGCACGGGGTCGGCGGCGACTGTAGGCACCATCAAT455110.28030729035464774No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT450340.27736939451629733No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAAT437130.26923320918619054No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT436440.26880823054290715No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT434600.26767495416081805No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT426410.2626306424383673No Hit
TCGGGTGTTGACGCGATGTGATTTCTGCCCACTGTAGGCACCATCAAT420260.25884278931345006No Hit
TTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT401190.24709736507082053No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG388440.23924449883623602No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAACTGTAGGCACCATCAAT382630.23566605547757435No Hit
TGTCCGGTGCGGAGTGCCCTTCGTCCTGGGACTGTAGGCACCATCAAT376930.23215536233740716No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT368400.22690164084870082No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT342690.2110665670533151No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT341650.2104260195330039No Hit
ATTGATCATCGACACTTCGAACGCACCTGTAGGCACCATCAAT337320.20775912456863127No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT335730.20677982595584782No Hit
TCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT330980.20385424833904178No Hit
TCGGGATAAGGATTGGCTCTAAGGGCTGCTGTAGGCACCATCAAT328610.20239453908602492No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT328220.20215433376590825No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT316640.1950220834916738No Hit
TTGCCAAGAATGTTTTCATTAATCAAGAACGACTGTAGGCACCATCAAT309140.19040275041250643No Hit
ATTGATCATCGACACTTCGAACGCACTCTGTAGGCACCATCAAT302000.1860051453211391No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTTCTGTAGGCACCATCAAT292530.1801724674198438No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT290460.1788975314899936No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT287440.1770374800367822No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT285090.17559008900530979No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAAT285040.17555929345144863No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCTGTAGGCACCATCAAT275100.16943713734385885No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT271540.1672444939089474No Hit
TCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT267980.16505185047403598No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT263870.16252045594665224No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTCTGTAGGCACCATCAAT261840.16127015645989096No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTACTGTAGGCACCATCAAT257730.15873876193250724No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT254610.1568171193715736No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCTACTGTAGGCACCATCAAT247400.1523764005048007No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT245710.15133551078429502No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAATGCTGTAGGCACCATCAAT244530.15060873571317268No Hit
TGCACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT243860.15019607529143372No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT242500.14935843622641137No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT232020.1429036881371215No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT231000.14227545883835474No Hit
ATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATCAA230950.14224466328449364No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT230400.14190591219202137No Hit
TAGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT228340.1406371353729434No Hit
TGGGCCGCCGGTGAAATACCACTACTCTCTGTAGGCACCATCAAT228220.14056322604367671No Hit
CTAAACCATTCGTAGACGACCTGCTTCCTGTAGGCACCATCAAT226620.13957776832012103No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT224550.1383028323902708No Hit
TCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT224470.13825355950409304No Hit
CGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT224410.1382166048394597No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATCTGTAGGCACCATCAAT221230.13625800761389273No Hit
GTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT215900.1329752015722978No Hit
ATGTGTTGTTGCCATGGTAATCCTGCTCTGTAGGCACCATCAAT215490.13272267803063664No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT213460.13147237854387536No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTGCTGTAGGCACCATCAAT211830.13046844348800296No Hit
AGCTACCATCTGTGGGATTATGACTGAACCTGTAGGCACCATCAAT211060.1299941919585418No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT210250.1294953039859917No Hit
TGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT209400.12897177957035275No Hit
TTGCCAAGAATGTTTTCATTAATCAAGAACGCTGTAGGCACCATCAAT208530.12843593693316935No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGACTGTAGGCACCATCAAT207910.1280540720652915No Hit
TGACCGGGGTCCGGTGCGGAGTGCCCTTCCTGTAGGCACCATCAAT204270.12581215574420226No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT204190.1257628828580245No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAATCTGTAGGCACCATCAAT201940.12437708293427428No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGCTGTAGGCACCATCAAT195660.12050916136931815No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT195120.12017656938761809No Hit
GCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT194810.11998563695367918No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCCTGTAGGCACCATCAAT193440.1191418387778846No Hit
AGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT192890.11880308768541233No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCTGTAGGCACCATCAAT192450.11853208681143451No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT192130.11833499526672338No Hit
TCCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT188890.11633944337652306No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA187730.11562498652694518No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCTGTAGGCACCATCAAT186400.11480582479423951No Hit
ACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT184600.11369718485523933No Hit
TCAACTTCTTAGAGGGACAAGTGGCGTCTGTAGGCACCATCAAT183160.11281027290403921No Hit
AGGAACCGCAGGTTCAGACATTTGGTGTATGTCTGTAGGCACCATCAAT182750.11255774936237806No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCCTGTAGGCACCATCAAT182120.112169725383728No Hit
TAGCCTCTGGCATGTTGGAACAATGTAGGTACTGTAGGCACCATCAAT181820.1119849520605613No Hit
GCGGGTGTTGACGCGATGTGATTTCTGCCCACTGTAGGCACCATCAAT175220.10791993895089402No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT173730.10700223144583278No Hit
ACTATGCCTGGGCAGGGCGAAGCCAGAGGCTGTAGGCACCATCAAT170050.10473567868165465No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT169160.1041875178229268No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCCTGTAGGCACCATCAAT167970.10345458364103224No Hit
TATGCTAAGACTTCACCAGTCAAAGCGACTGTAGGCACCATCAAT163980.10099709844291521No Hit
TCGACTGCATAATTTGTGGTAGTGGGCTGTAGGCACCATCAAT163620.10077537045511517No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)