FastQCFastQC Report
Wed 6 Sept 2023
SRR13762832_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762832_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16266657
Total Bases754.9 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT3978372.4457207156946876No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT3130031.9241999139712602No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGCTGTAGGCACCATCAAT2236001.3745909808020171No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT2207151.3568553145246747No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT2007321.2340089300462904No Hit
TCGACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT1551160.9535825338912599No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT1394760.857434935770761No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT1128680.6938610680731757No Hit
ACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT904200.5558609860649303No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT804430.4945269332229726No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT794980.4887175035411394No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT788490.4847277470718169No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG782750.4811990564502589No Hit
ACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT777320.4778609397124437No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT769490.4730474122617819No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAA755620.4645207678504564No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT692880.42595107279879324No Hit
TCACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT688400.4231969728014797No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA683420.42013549557232316No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT663400.4078281112093284No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT646790.39761703956750305No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT645480.3968117112200743No Hit
AGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT634840.39027072372645466No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT607860.3736846482962049No Hit
TCGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT565550.34767438693764796No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT548490.3371866757871639No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT536340.3297174090533783No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT509160.3130083827303914No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT481300.2958813233720979No Hit
AACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT480390.2953218968101436No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT479150.2945596012751729No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT462410.2842686115530683No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT451900.2778075421397279No Hit
AGCGAGCGCACGGGGTCGGCGGCGACTGTAGGCACCATCAAT441110.2711743414765554No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT433020.2662009778653352No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT430710.2647808950542204No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAAT428940.26369277965349613No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT421530.25913744907758246No Hit
TCGGGTGTTGACGCGATGTGATTTCTGCCCACTGTAGGCACCATCAAT411540.25299605198535874No Hit
TTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT395900.24338129217330887No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAACTGTAGGCACCATCAAT373790.22978907098121024No Hit
TGTCCGGTGCGGAGTGCCCTTCGTCCTGGGACTGTAGGCACCATCAAT373510.22961693973137812No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT361870.22246119777407244No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT336440.20682799176253608No Hit
ATTGATCATCGACACTTCGAACGCACCTGTAGGCACCATCAAT336150.2066497129680671No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT333320.2049099578358356No Hit
TCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT330900.20342225203371536No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT330830.20337921922125732No Hit
TCGGGATAAGGATTGGCTCTAAGGGCTGCTGTAGGCACCATCAAT328570.2019898741333268No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT321520.19765585516434017No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT314840.1935492953469173No Hit
TTGCCAAGAATGTTTTCATTAATCAAGAACGACTGTAGGCACCATCAAT308980.18994683418971703No Hit
ATTGATCATCGACACTTCGAACGCACTCTGTAGGCACCATCAAT300830.1849365853106757No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT288060.17708617080940478No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT285990.17581362906957465No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTTCTGTAGGCACCATCAAT285040.1752296123290729No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAAT282640.17375420161622637No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT278600.1712705935829347No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCCTGTAGGCACCATCAAT266550.16386280229551775No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT264810.16279312952870403No Hit
TCCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT262270.16123165319094143No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT259800.1597132096656369No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTCTGTAGGCACCATCAAT256610.15775214292647838No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTACTGTAGGCACCATCAAT256410.15762919203374115No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAAT251440.15457386234922146No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCTACTGTAGGCACCATCAAT245860.1511435324418533No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAATGCTGTAGGCACCATCAAT241380.14838943244453978No Hit
TGCACGCGCGCTACACTGACTGGCTCAGCGCTGTAGGCACCATCAAT241040.14818041592688652No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT239750.1473873826687315No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT236900.14563533244722626No Hit
ATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATCAA228890.14071114919310096No Hit
TAGCGAGCGCACGGGGTCGGCGGCGACCTGTAGGCACCATCAAT227580.1399058208456722No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT227200.13967221414947154No Hit
TGGGCCGCCGGTGAAATACCACTACTCTCTGTAGGCACCATCAAT226620.13931565656053363No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT225110.13838737732036768No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT223190.13720704875009043No Hit
CTAAACCATTCGTAGACGACCTGCTTCCTGTAGGCACCATCAAT222960.13706565522344266No Hit
TCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT221970.13645704830439345No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT218750.13447753893132436No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATCTGTAGGCACCATCAAT218420.13427466995830797No Hit
CGCGCGCTACACTGACTGGCTCAGCGTCTGTAGGCACCATCAAT217070.1334447514323318No Hit
ATGTGTTGTTGCCATGGTAATCCTGCTCTGTAGGCACCATCAAT216790.1332726201824997No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCCTGTAGGCACCATCAAT212930.13089966795267152No Hit
GTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT211500.13002056906960047No Hit
TTGCCAAGAATGTTTTCATTAATCAAGAACGCTGTAGGCACCATCAAT209570.1288340929546864No Hit
ACGCGCGCTACACTGACTGGCTCAGCGTGCTGTAGGCACCATCAAT207480.12754925612558252No Hit
AGCTACCATCTGTGGGATTATGACTGAACCTGTAGGCACCATCAAT207020.12726646907228695No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGCTGTAGGCACCATCAAT206960.12722958380446578No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGACTGTAGGCACCATCAAT206060.12667630478714834No Hit
TGCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT205450.12630130456429983No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT201550.12390376215592423No Hit
TGACCGGGGTCCGGTGCGGAGTGCCCTTCCTGTAGGCACCATCAAT200570.1233013027815119No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAATCTGTAGGCACCATCAAT199400.12258204005899923No Hit
CAGTGCGGTAACGCGACCGATCCCGGAGCTGTAGGCACCATCAAT193320.118844332919788No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT192700.11846318515230266No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCCTGTAGGCACCATCAAT192550.11837097198274975No Hit
GCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT191830.1179283487688958No Hit
AGTGCGGTAACGCGACCGATCCCGGAGACTGTAGGCACCATCAAT190260.11696318426090868No Hit
CGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT189490.11648982332387041No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCTGTAGGCACCATCAAT186730.11479310100409691No Hit
TCCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT186670.11475621573627573No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA185030.11374801841583061No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCTGTAGGCACCATCAAT184120.11318859185387631No Hit
ACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT181100.11133203337354443No Hit
AGGAACCGCAGGTTCAGACATTTGGTGTATGTCTGTAGGCACCATCAAT180500.1109631806953328No Hit
TAGCCTCTGGCATGTTGGAACAATGTAGGTACTGTAGGCACCATCAAT180430.11092014788287477No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCCTGTAGGCACCATCAAT178830.10993654074097708No Hit
TCAACTTCTTAGAGGGACAAGTGGCGTCTGTAGGCACCATCAAT177260.10897137623298997No Hit
TCGTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT174510.10728080145785332No Hit
GCGGGTGTTGACGCGATGTGATTTCTGCCCACTGTAGGCACCATCAAT171900.10567629230763273No Hit
ACTATGCCTGGGCAGGGCGAAGCCAGAGGCTGTAGGCACCATCAAT168740.1037336682023848No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCCTGTAGGCACCATCAAT167170.10276850369439769No Hit
GCTGAGAAGACGGTCGAACTTGACTATCTCTGTAGGCACCATCAAT164770.10129309298155115No Hit
TATGCTAAGACTTCACCAGTCAAAGCGACTGTAGGCACCATCAAT163960.10079514186596544No Hit
TCGACTGCATAATTTGTGGTAGTGGGCTGTAGGCACCATCAAT163000.10020497758082685No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)