FastQCFastQC Report
Wed 6 Sept 2023
SRR13762836_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13762836_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15322622
Total Bases724.9 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT7608034.965227230691979No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT4724573.083395257025854No Hit
AGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCAT4557742.974517024566683No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT3979132.596898885843428No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA3961222.5852102858113972No Hit
GCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATC2832891.8488284837934397No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT2730941.7822928738958645No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT2575331.6807371479894238No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT1932491.2612005960859702No Hit
CGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT1538931.0043516050973522No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT1518190.9908160626817004No Hit
TTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT1495940.9762950492415724No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT1332360.8695378636893868No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT1306470.8526412777134358No Hit
CGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT1301700.8495282334837994No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT1259420.8219350447984686No Hit
TGACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT1248860.8150432739253113No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT1169470.7632309927112997No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT1148350.7494474509649849No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT1082340.7063673567095762No Hit
TCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT1079050.7042202046098899No Hit
GACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT1008390.6581053817029487No Hit
TCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT998130.6514093997750515No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGTAGGCACCATCAAT988200.6449287856869405No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT968560.6321111360705759No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT862460.5628671124302355No Hit
TCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT826470.5393789652971926No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT826050.5391048607738284No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT788530.5146181900199587No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN774290.5053247414182769No Hit
TTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGTAGGCACCATCAAT770670.5029622214788043No Hit
TCGACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT730510.4767526080066454No Hit
TAAGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACC713000.46532505990162776No Hit
TAGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCA698460.4558358223546857No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGTAGGCACCATCAAT628390.4101060510400896No Hit
TTGACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT612560.3997749210285289No Hit
TCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT596470.3892741072644095No Hit
CCGCCACGCAGTTTTATCCGGTAAACTGTAGGCACCATCAAT572160.3734086764001618No Hit
AAGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCA550090.35900513632718994No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT519840.3392630843467913No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT501020.3269805911808044No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG494120.32247744543982093No Hit
GCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT476750.31114126550925814No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGCTGTAGGCACCATCAAT457320.2984606681545756No Hit
TGACTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT432210.2820731334363009No Hit
CCAGGAGTGGAGCCTGCGGCTTAATTTGCTGTAGGCACCATCAAT380680.24844311893878215No Hit
TCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGCTGTAGGCACCATC379400.24760775277233882No Hit
TGGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT365600.23860146129037182No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA342380.22344739692723609No Hit
GACTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT336780.2197926699490466No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCAA334160.21808277982710791No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT328060.21410173794015147No Hit
GGCGGCGTCCGGTGAGCTCTCGCTGGCCTGTAGGCACCATCAAT326760.21325331917735751No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT323240.21095606221963836No Hit
CGCCACGCAGTTTTATCCGGTAAAGCGAATGCTGTAGGCACCATCAAT315890.2061592330607647No Hit
GCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT304080.19845167491569002No Hit
GCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT294620.1922777968418199No Hit
CCCCGCCACGCAGTTTTATCCGGTAAACTGTAGGCACCATCAAT278440.18171824639412237No Hit
TGTTGAACCCCATTCGTGATGGGGATCGGGGATTGCTGTAGGCACCATCA278260.18160077302696628No Hit
ACCAGGAGTGGAGCCTGCGGCTTAATTTGCTGTAGGCACCATCAAT273000.17816794018673826No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT270350.1764384711702736No Hit
CCCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT263330.17185700985118604No Hit
TTGCCAAGAATGTTTTCATTAATCAAGAACGACTGTAGGCACCATCAAT251770.16431260916049487No Hit
ACTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT251280.16399282054990327No Hit
CTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAAT247370.16144103796334597No Hit
TCTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT246590.16093198670566958No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGTAGGCACCATCAAT241130.1573686279019348No Hit
TGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCAAT240700.15708799708039525No Hit
CCCGCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT237460.1549734764715856No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGTAGGCACCATCAAT235760.15386400578177806No Hit
GGTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAA224060.14622823691663214No Hit
AGGCCGAAGTGGAGAAGGGTTCCATGTGCTGTAGGCACCATCAAT219660.14335666571948327No Hit
GCCACGCAGTTTTATCCGGTAAAGCGCTGTAGGCACCATCAAT216890.1415488811249145No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCTGTAGGCACCATCAAT211440.1379920486193551No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGACTGTAGGCACCATCAAT210430.13733289250364591No Hit
TCGCCACGCAGTTTTATCCGGTAAAGCGAATGCTGTAGGCACCATCAAT209830.13694131461312561No Hit
ACCTCTAGCATCACCAGTATTAGAGGCCTGTAGGCACCATCAAT208960.1363735266718712No Hit
TGGCCGGGCGCGACCCGCTCCGGGGACAGTGCCAGGCTGTAGGCACCATC206870.13500953035322544No Hit
AGACAGGTTAGTTTTACCCTACTGATGATGCTGTAGGCACCATCAAT206530.13478763621526396No Hit
TTGACTGCATAATTTGTGGTAGTGGGGGCTGTAGGCACCATCAAT202980.1324708003630188No Hit
TGCAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCA200290.13071522615385278No Hit
TCCGCCACGCAGTTTTATCCGGTAAACTGTAGGCACCATCAAT198540.12957312397316856No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT196820.12845060068701036No Hit
CCGCCACGCAGTTTTATCCGGTAAAGCGAATGCTGTAGGCACCATCAAT194950.12723018292822208No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGCTGTAGGCACCATCAAT194010.12661671089974025No Hit
TCCCGCCACGCAGTTTTATCCGGTAAAGCTGTAGGCACCATCAAT193500.126283869692798No Hit
CAGGAGTGGAGCCTGCGGCTTAATTTGCTGTAGGCACCATCAAT192570.12567692396249155No Hit
GCCGGGCGCGACCCGCTCCGGGGACAGTGCCAGGCTGTAGGCACCATCAA187010.1220483021770034No Hit
CCCGCCACGCAGTTTTATCCGGTAAACTGTAGGCACCATCAAT186770.12189167102079526No Hit
TGTGCGCCGCGACCGGCTCCGGGACGGCTGGCTGTAGGCACCATCAAT182680.11922241506708187No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGACTGTAGGCACCATCAAT172650.11267653799721744No Hit
GACAGGTTAGTTTTACCCTACTGATGATGCTGTAGGCACCATCAAT170780.11145612023842916No Hit
AGCATCGCGAAGGCCCGCGGCGGGTGTTGACGCGATGTCTGTAGGCACCA168990.1102879128650436No Hit
TCAGGTTAGTTTTACCCTACTGATGATGCTGTAGGCACCATCAAT167120.10906749510625532No Hit
CGCAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGCTGTAGGCACCATCA166240.10849318086682554No Hit
TTTTTTTCACTGACCCGGTGAGGCGGGGCTGTAGGCACCATCAAT159080.10382035137328324No Hit
TTTGAACCCCATTCGTGATGGGGATCGGGGATTCTGTAGGCACCATCAAT157200.10259340731631962No Hit
ACTGCATAATTTGTGGTAGTGGGGCTGTAGGCACCATCAAT156650.10223446091667601No Hit
TCTAAACCATTCGTAGACGACCTGCTTCTGTAGGCACCATCAAT156410.10207782976046789No Hit
GCCGCCACGCAGTTTTATCCGGTAAAGCCTGTAGGCACCATCAAT153510.10018520328961976No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)