FastQCFastQC Report
Wed 6 Sept 2023
SRR13777331.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13777331.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506
Total Bases13.8 kbp
Sequences flagged as poor quality0
Sequence length24-33
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATCGTTTTTAAACGGGTTTGCGG265.138339920948617No Hit
AATCGTTTTTAAACGGGTTTGCGGTG163.1620553359683794No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCG142.766798418972332No Hit
TCAGCTGATGCACAATCGTTTTTAAACGGG142.766798418972332No Hit
AATCGTTTTTAAACGGGTTTGCGGTGT132.5691699604743086No Hit
AATCGTTTTTAAACGGGTTTGCGGT122.371541501976284No Hit
TTTTTAAACGGGTTTGCGGTGTAAG112.1739130434782608No Hit
TCAGCTGATGCACAATCGTTTTTAAACGG101.9762845849802373No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGC91.7786561264822136No Hit
AGCTGATGCACAATCGTTTTTAAACGGGT81.5810276679841897No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTG81.5810276679841897No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAG71.383399209486166No Hit
AAATCGTTTTTAAACGGGTTTGCGG71.383399209486166No Hit
TTTTAAACGGGTTTGCGGTGTAAG71.383399209486166No Hit
AAATCGTTTTTAAACGGGTTTGCGGTG61.185770750988142No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGT61.185770750988142No Hit
ACAATCGTTTTTAAACGGGTTTGCGG61.185770750988142No Hit
AGCTGATGCACAATCGTTTTTAAACGGG61.185770750988142No Hit
ATCGTTTTTAAACGGGTTTGCGGTGT61.185770750988142No Hit
TCAGCTGATGCACAATCGTTTTTAAACG50.9881422924901186No Hit
AAATCGTTTTTAAACGGGTTTGCGGT50.9881422924901186No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGC50.9881422924901186No Hit
TTGATGCACAATCGTTTTTAAACGGGTTTG50.9881422924901186No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTA50.9881422924901186No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCG40.7905138339920948No Hit
ACAATCGTTTTTAAACGGGTTTGCGGT40.7905138339920948No Hit
TCAGCTGATGCACAATCGTTTTTAAACGGGT40.7905138339920948No Hit
ATCGTTTTTAAACGGGTTTGCGGTG40.7905138339920948No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCG40.7905138339920948No Hit
TCGTTTTTAAACGGGTTTGCGGTGT40.7905138339920948No Hit
AGTCAGCTGATGCACAATCGTTTTTAAA40.7905138339920948No Hit
AGCTGATGCACAATCGTTTTTAAACG40.7905138339920948No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTG40.7905138339920948No Hit
TTTAAACGGGTTTGCGGTGTAAGT40.7905138339920948No Hit
TTTTAAACGGGTTTGCGGTGTAAGTG40.7905138339920948No Hit
AGCTGATGCACAATCGTTTTTAAA40.7905138339920948No Hit
TTAAACGGGTTTGCGGTGTAAGTGCA30.592885375494071No Hit
TTTAAACGGGTTTGCGGTGTAAGTG30.592885375494071No Hit
TTGATGCACAATCGTTTTTAAACGGGTTT30.592885375494071No Hit
CTGATGCACAATCGTTTTTAAACGGG30.592885375494071No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAGTG30.592885375494071No Hit
TTTTTAAACGGGTTTGCGGTGTAAGT30.592885375494071No Hit
CAGTCAGCTGATGCACAATCGTTTTTAAACGGG30.592885375494071No Hit
TCGTTTTTAAACGGGTTTGCGGTGTA30.592885375494071No Hit
CAGTCAGCTGATGCACAATCGTTTTTAAA30.592885375494071No Hit
TGCACAATCGTTTTTAAACGGGTTTGCGGT30.592885375494071No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGTA30.592885375494071No Hit
TTTAAACGGGTTTGCGGTGTAAGTGC30.592885375494071No Hit
ATCGTTTTTAAACGGGTTTGCGGT30.592885375494071No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTA30.592885375494071No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAG20.3952569169960474No Hit
TGATGCACAATCGTTTTTAAACGGGTTT20.3952569169960474No Hit
CAGTCAGCTGATGCACAATCGTTTTTAA20.3952569169960474No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTAAGT20.3952569169960474No Hit
TTGATGCACAATCGTTTTTAAACGGGTT20.3952569169960474No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGT20.3952569169960474No Hit
TTTTAAACGGGTTTGCGGTGTAAGT20.3952569169960474No Hit
ATGCACAATCGTTTTTATAAGGGTTTG20.3952569169960474No Hit
TCAGCTGATGCACAATCGTTTTTAAAC20.3952569169960474No Hit
TGATGCACAATCGTTTTTATAAGGG20.3952569169960474No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGT20.3952569169960474No Hit
GTTTTTAAACGGGTTTGCGGTGTAA20.3952569169960474No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTC20.3952569169960474No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTG20.3952569169960474No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTA20.3952569169960474No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGT20.3952569169960474No Hit
AAACGGGTTTGCGGTGTAAGTGCAGC20.3952569169960474No Hit
TCAATCGTTTTTAAACGGGTTTGCGGTGT20.3952569169960474No Hit
TGCACAATCGTTTTTAAACGGGTTTGCGG20.3952569169960474No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCA20.3952569169960474No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAG20.3952569169960474No Hit
ATGCACAATCGTTTTTAAACGGGTTTG20.3952569169960474No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTT20.3952569169960474No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTG20.3952569169960474No Hit
TTCAGCTGATGCACAATCGTTTTTAAACGGG20.3952569169960474No Hit
AGCTGATGCACAATCGTTTTTAAAC20.3952569169960474No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGTAAGT20.3952569169960474No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAA20.3952569169960474No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGT20.3952569169960474No Hit
TCAGCTGATGCACAATCGTTTTTAAA20.3952569169960474No Hit
TGATGCACAATCGTTTTTAAACGGGTT20.3952569169960474No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC20.3952569169960474No Hit
CTGATGCACAATCGTTTTTAAACGGGTTTGCGG20.3952569169960474No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTC20.3952569169960474No Hit
TCGTTTTTAAACGGGTTTGCGGTG20.3952569169960474No Hit
TTTTAAACGGGTTTGCGGTGTAAGAGC10.1976284584980237No Hit
TTTTAAACGAGTTTGCGGTGTAAGTGC10.1976284584980237No Hit
TTTTTTAAACGGGTTTGCGGTGTAAGTGC10.1976284584980237No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCTG10.1976284584980237No Hit
TCAGCTGATGCATAATCGTTTTTAAACGGG10.1976284584980237No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAG10.1976284584980237No Hit
AAATCGTTTTTAAACGGGTTTGCG10.1976284584980237No Hit
TAACGGGTTTGCGGTGTAAGTGCAGCCCG10.1976284584980237No Hit
TGATGCACAATCGTTTTTATAGGGGTTTG10.1976284584980237No Hit
TAATCGTTTTTAAACGGGTTTGCGGT10.1976284584980237No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCG10.1976284584980237No Hit
TTAGCTGATGCACAATCGTTTTTAAACGGG10.1976284584980237No Hit
TTAGCTGATGCACAATCGTTTTTAAACGGGT10.1976284584980237No Hit
TGATGCACAATCGTTTTTAAACGGGTTTG10.1976284584980237No Hit
AAAACGGGTTTGCGGTGTAAGTAC10.1976284584980237No Hit
TCAGTCAGCTGATGCACAATCGTTTTTAA10.1976284584980237No Hit
ATAAGGGTTTGCGGTGTAAGTGCAGCC10.1976284584980237No Hit
AGTCAGCTGATGCACAATCGTTTTTAAACG10.1976284584980237No Hit
TTTTTAAACGGGTTTGCGGTGTAA10.1976284584980237No Hit
ACAATCGTTTTTATAAGGGTTTGCGGTG10.1976284584980237No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCGG10.1976284584980237No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGT10.1976284584980237No Hit
AATCGTTTTTAAGCGGGTTTGCGGTGTAAGTGC10.1976284584980237No Hit
ATGCACAATCGTTTTTATAAGGGTTTGCG10.1976284584980237No Hit
GCACAATCGTTTTTAAACGGGTTTG10.1976284584980237No Hit
TAGCTGATGCACAATCGTTTTTAAACGGG10.1976284584980237No Hit
CAATCGTTTTTAAATGGGTTTGCGGTGTAA10.1976284584980237No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGC10.1976284584980237No Hit
TCAGTCAGCTGATGCACAATCGTTTTTAAA10.1976284584980237No Hit
AGTCAGCTGATGCACAATCGTTTTTAAACGG10.1976284584980237No Hit
AATCGTTTTTAACCGGGTTTGCGGTG10.1976284584980237No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAG10.1976284584980237No Hit
CAGTCAGCTGATGCACAATCGTTTTTAAAC10.1976284584980237No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAG10.1976284584980237No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCC10.1976284584980237No Hit
TTTTCAAACGGGTTTGCGGTGTAAGTG10.1976284584980237No Hit
TTGATGCACAATCGTTTTTATAAGGGTTTG10.1976284584980237No Hit
TCGTTTTTAGACGGGTTTGCGGTGT10.1976284584980237No Hit
TTTAAACGTGTTTGCGGTGTAAGTGCAG10.1976284584980237No Hit
CACAATCGTTTTTAAACGGGTTTGCGGTG10.1976284584980237No Hit
GTCAGCTGATGCACAATCGTTTTTAAACTG10.1976284584980237No Hit
CAATCGTTTTTAAACGGGTTTGCGGT10.1976284584980237No Hit
CTGATGCACAATCGTTTTTAAACGGGTTTG10.1976284584980237No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAGC10.1976284584980237No Hit
AATCGTTTTTAAACGGGTTTGCGATGTAAGT10.1976284584980237No Hit
CAATCGTTTTTAAACGGGTTTGCGGTG10.1976284584980237No Hit
AAACGGGTTTGCGGTGTAAGTGCA10.1976284584980237No Hit
TTTTAAACGGGTTTGCGATGTAAGTGC10.1976284584980237No Hit
CACAATCGTTTTTAAACGGGTTTG10.1976284584980237No Hit
TGCACAATCGTTTTTAAACGGGTTTGTGG10.1976284584980237No Hit
TGCACAATCGTTTTTAAACGGGTTT10.1976284584980237No Hit
TGCACAATCGTTTTTAAACGGGTTTG10.1976284584980237No Hit
TTTTTAAACGGGTTTGCAGTGTAAGTGCAGC10.1976284584980237No Hit
TTAAACGGGTTTGCGGTGTAAGTGCAGCC10.1976284584980237No Hit
CAATCGTTTTTAAACGGATTTGCGGTG10.1976284584980237No Hit
TTGATGCACAATCGTTTTTAAACGGG10.1976284584980237No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAGT10.1976284584980237No Hit
GCACAATCGTTTTTAAACGGGTTTGCGG10.1976284584980237No Hit
AATCGTTTTTAAAACGGGTTTGCGGTG10.1976284584980237No Hit
ACAATCGTTTTTAAACGGGTTTGC10.1976284584980237No Hit
TTGATGCACAATCGTTTTTAAACGGGT10.1976284584980237No Hit
AATCGTTTTTAAACGGGTTTGTGGTG10.1976284584980237No Hit
GTCAGCTGATGCACAATCGTTTTTAAACGG10.1976284584980237No Hit
GTTTTTAAACGGGTTTGCGGTGTAAG10.1976284584980237No Hit
GTCAGCTGATGCACAATCGTTTTTAAACGGG10.1976284584980237No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGC10.1976284584980237No Hit
GTCAGCTGATGCACAATCGTTTTTAAAC10.1976284584980237No Hit
GCTGATGCACAATCGTTTTTAAACGG10.1976284584980237No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAA10.1976284584980237No Hit
AGTCAGTTGATGCACAATCGTTTTTAAACG10.1976284584980237No Hit
TCAGCTGATGCACAATCGTTTTTAA10.1976284584980237No Hit
CTGATGCACAATCGTTTTTAAACGG10.1976284584980237No Hit
CGTTTTTAAACGGGTTTGCGGTGTAAGTG10.1976284584980237No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCC10.1976284584980237No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTT10.1976284584980237No Hit
ATGCACAATCGTTTTTATAAGGGTT10.1976284584980237No Hit
TTCAGCTGATGCACAATCGTTTTTAAACGG10.1976284584980237No Hit
AAAACGGGTTTGCGGTGTAAGTGC10.1976284584980237No Hit
CGTTTTTAAACGGGTTTGCGGTGT10.1976284584980237No Hit
GCTTCAGTCAGCTGATGCACTATCGTTTTTAAA10.1976284584980237No Hit
AAAACGGGTTTGCGGTGTAAGTGT10.1976284584980237No Hit
CGTTTTTAAACGGGTTTGCGGTGTAAGTGCA10.1976284584980237No Hit
TGCACAATCGTTTTTATAAGGGTTTGCGG10.1976284584980237No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGTAA10.1976284584980237No Hit
CTGATGCACAATCGTTTTTAAACG10.1976284584980237No Hit
TCTGATGCACAATCGTTTTTAAACGGGT10.1976284584980237No Hit
AGTCAGCTGATGTACAATCGTTTTTAAACG10.1976284584980237No Hit
ATCGTTTTTAAGCGGGTTTGCGGTGT10.1976284584980237No Hit
ACAATCGTTTTTAAAACGGGTTTGCGGTG10.1976284584980237No Hit
TTAAACGGGTTTGCGGTGTAAGTGCAG10.1976284584980237No Hit
AGCTGATGCACAATCGTTTTTAAACGG10.1976284584980237No Hit
GCTGATGCACAATCGTTTTTAAACG10.1976284584980237No Hit
TTAAACGGGTTTGCGGTGTAAGTG10.1976284584980237No Hit
CGTTTTTAAACGGGTTTGCGGTGTAAGT10.1976284584980237No Hit
CTGATGCACAATCGTTTTTAAACGGGTT10.1976284584980237No Hit
AATCGTTTTTAAACGGGTTGCGGTG10.1976284584980237No Hit
GTTTTTAAACGGGTTTGCGGTGTAAGTGC10.1976284584980237No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGTAA10.1976284584980237No Hit
CAGCTGATGCACAATCGTTTTTAAACG10.1976284584980237No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCA10.1976284584980237No Hit
ATGCACAATCGTTTTTAAACGGGTTTGC10.1976284584980237No Hit
TTGTTTTTAAACGGGTTTGCGGTGT10.1976284584980237No Hit
CGTTTTTAAACGGGTTTGCGGTGTA10.1976284584980237No Hit
TCAGCTGATGCACAATCGTTTTTAAACGGC10.1976284584980237No Hit
CTGATGCACAATCGTTTTTAAACGGGT10.1976284584980237No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGTAAG10.1976284584980237No Hit
AAAACGGGTTTGCGGTGTAAGTGCA10.1976284584980237No Hit
GTTTTTAAAACGGGTTTGCGGTGTAAGT10.1976284584980237No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC10.1976284584980237No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGT10.1976284584980237No Hit
TTAAACGGGTTTGCGGTGTAAGTGC10.1976284584980237No Hit
AACGGGTTTGCGGTGTAAGTGCAGC10.1976284584980237No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCA10.1976284584980237No Hit
TCAGCTGATGCACAATCGTTTTTAAACGGGTTT10.1976284584980237No Hit
CAATCGTTTTTAAACGGGTTTGCGG10.1976284584980237No Hit
ACAATCGTTTTTTAAACGGGTTTGCGGTG10.1976284584980237No Hit
TGATGCACAATCGTTTTTAAACGGGTTTGCG10.1976284584980237No Hit
AGTCAGCTGATGCACAATCGTTTTTAA10.1976284584980237No Hit
GTTTTTAAACGGGTTTGCGGTGTA10.1976284584980237No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGT10.1976284584980237No Hit
ATGCACAATCGTTTTTATAAGGGTTT10.1976284584980237No Hit
TTATAAGGGTTTGCGGTGTAAGTGC10.1976284584980237No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAGC10.1976284584980237No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGT10.1976284584980237No Hit
AACGGGTTTGCGGTGTAAGTGCAGCC10.1976284584980237No Hit
CAGCTGATGCACAATCGTTTTTATAAGGGTT10.1976284584980237No Hit
TTCGTTTTTAAACGGGTTTGCGGTGTAAG10.1976284584980237No Hit
TAGCTGATGCACAATCGTTTTTAAACGGGT10.1976284584980237No Hit
GCTGATGCACAATCATTTTTATAAGGGT10.1976284584980237No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)