FastQCFastQC Report
Wed 27 Sept 2023
SRR13777332.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13777332.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences488
Total Bases13.3 kbp
Sequences flagged as poor quality0
Sequence length24-33
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATCGTTTTTAAACGGGTTTGCGG295.942622950819672No Hit
AATCGTTTTTAAACGGGTTTGCGGTGT204.098360655737705No Hit
AATCGTTTTTAAACGGGTTTGCGGTG193.8934426229508197No Hit
AATCGTTTTTAAACGGGTTTGCGGT122.459016393442623No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCG102.0491803278688523No Hit
AAATCGTTTTTAAACGGGTTTGCGG102.0491803278688523No Hit
TCAGCTGATGCACAATCGTTTTTAAACGGG102.0491803278688523No Hit
AAATCGTTTTTAAACGGGTTTGCGGTG91.8442622950819672No Hit
AGCTGATGCACAATCGTTTTTAAACG71.4344262295081966No Hit
TCAGCTGATGCACAATCGTTTTTAAACGG71.4344262295081966No Hit
TTGATGCACAATCGTTTTTAAACGGGTTTG71.4344262295081966No Hit
AGCTGATGCACAATCGTTTTTAAACGGG71.4344262295081966No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGC61.2295081967213115No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGC61.2295081967213115No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGTA61.2295081967213115No Hit
TTTTAAACGGGTTTGCGGTGTAAG61.2295081967213115No Hit
ATCGTTTTTAAACGGGTTTGCGGTGT61.2295081967213115No Hit
AGCTGATGCACAATCGTTTTTAAACGGGT51.0245901639344261No Hit
TCGTTTTTAAACGGGTTTGCGGTGT51.0245901639344261No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAG51.0245901639344261No Hit
AGCTGATGCACAATCGTTTTTAAA51.0245901639344261No Hit
ATCGTTTTTAAACGGGTTTGCGGT51.0245901639344261No Hit
TTTTTAAACGGGTTTGCGGTGTAAG51.0245901639344261No Hit
TCGTTTTTAAACGGGTTTGCGGTG51.0245901639344261No Hit
ACAATCGTTTTTAAACGGGTTTGCGGT40.819672131147541No Hit
CTGATGCACAATCGTTTTTAAACGGG40.819672131147541No Hit
TTTAAACGGGTTTGCGGTGTAAGT40.819672131147541No Hit
TCAGCTGATGCACAATCGTTTTTAAACG30.6147540983606558No Hit
AAATCGTTTTTAAACGGGTTTGCGGT30.6147540983606558No Hit
AGTCAGCTGATGCACAATCGTTTTTAAACG30.6147540983606558No Hit
TTTAAACGGGTTTGCGGTGTAAGTG30.6147540983606558No Hit
ATCGTTTTTAAACGGGTTTGCGGTG30.6147540983606558No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAGTG30.6147540983606558No Hit
AGTCAGCTGATGCACAATCGTTTTTAAACGGG30.6147540983606558No Hit
TTTTTAAACGGGTTTGCGGTGTAAGT30.6147540983606558No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTG30.6147540983606558No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGT30.6147540983606558No Hit
GTCAGCTGATGCACAATCGTTTTTAAACGGG30.6147540983606558No Hit
TGATGCACAATCGTTTTTAAACGGG30.6147540983606558No Hit
ACAATCGTTTTTAAACGGGTTTGCGG30.6147540983606558No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGT30.6147540983606558No Hit
TTTTAAACGGGTTTGCGGTGTAAGTG30.6147540983606558No Hit
TGCACAATCGTTTTTAAACGGGTTTGCGG30.6147540983606558No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCA30.6147540983606558No Hit
CGTTTTTAAACGGGTTTGCGGTGT30.6147540983606558No Hit
GCTGATGCACAATCGTTTTTAAACG30.6147540983606558No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTG30.6147540983606558No Hit
TCAGCTGATGCACAATCGTTTTTAAA30.6147540983606558No Hit
GTTTTTAAACGGGTTTGCGGTGTAAGT30.6147540983606558No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC30.6147540983606558No Hit
TAACGGGTTTGCGGTGTAAGTGCAGCCCG20.4098360655737705No Hit
TTAAACGGGTTTGCGGTGTAAGTGCA20.4098360655737705No Hit
TGATGCACAATCGTTTTTAAACGGGTTTG20.4098360655737705No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTAAGT20.4098360655737705No Hit
TTTTTAAACGGGTTTGCGGTGTAA20.4098360655737705No Hit
TCAGCTGATGCACAATCGTTTTTAAACGGGT20.4098360655737705No Hit
AGTCAGCTGATGCACAATCGTTTTTAAACGG20.4098360655737705No Hit
TTTTAAACGGGTTTGCGGTGTAAGT20.4098360655737705No Hit
TTGATGCACAATCGTTTTTATAAGGGTTTG20.4098360655737705No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCG20.4098360655737705No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCT20.4098360655737705No Hit
CTGATGCACAATCGTTTTTAAACGGGTTTG20.4098360655737705No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGT20.4098360655737705No Hit
CAATCGTTTTTAAACGGGTTTGCGGTG20.4098360655737705No Hit
AGTCAGCTGATGCACAATCGTTTTTAAA20.4098360655737705No Hit
TGATGCACAATCGTTTTTAAACGGGT20.4098360655737705No Hit
TTGATGCACAATCGTTTTTAAACGGG20.4098360655737705No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAGT20.4098360655737705No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTA20.4098360655737705No Hit
CAGCTGATGCACAATCGTTTTTAAACGGGT20.4098360655737705No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGT20.4098360655737705No Hit
AAAACGGGTTTGCGGTGTAAGTGC20.4098360655737705No Hit
CAGTCAGCTGATGCACAATCGTTTTTAAA20.4098360655737705No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTT20.4098360655737705No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTG20.4098360655737705No Hit
AGCTGATGCACAATCGTTTTTAAACGG20.4098360655737705No Hit
AAAACGGGTTTGCGGTGTAAGTGCA20.4098360655737705No Hit
ACAATCGTTTTTTAAACGGGTTTGCGGTG20.4098360655737705No Hit
AGTCAGCTGATGCACAATCGTTTTTAA20.4098360655737705No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTA20.4098360655737705No Hit
CTGATGCACAATCGTTTTTAAACGGGTTTGCGG20.4098360655737705No Hit
ACTCGTTTTTAAACGGGTTTGCGGTG10.20491803278688525No Hit
TGATGCACAATCGTTTTTATAAGGGTTTG10.20491803278688525No Hit
AGTCAGCTGGTGCACAATCGTTTTTAA10.20491803278688525No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAG10.20491803278688525No Hit
CGTTTTTAAACGGGTTTGCGGTGTAAGTGC10.20491803278688525No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCA10.20491803278688525No Hit
AAATCGTTTTTAAACGGGTTTGCG10.20491803278688525No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCG10.20491803278688525No Hit
TACACAATCGTTTTTAAACGGGTTTGCGGT10.20491803278688525No Hit
GCTGATGCACAATCGTTTTTAAACGGGT10.20491803278688525No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAG10.20491803278688525No Hit
ACAATCATTTTTAAACGGGTTTGCGGTG10.20491803278688525No Hit
ACAATCGTTTTTATAAGGGTTTGCGGT10.20491803278688525No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC10.20491803278688525No Hit
TTTTTTAAACGGGTTTGCGGTGTAAGTGCAGC10.20491803278688525No Hit
TTGATGCACAATCGTTTTTATAAG10.20491803278688525No Hit
TGATGCACAATCGTTTTTAAACGGGTTT10.20491803278688525No Hit
TCAGTCAGCTGATGCACAATCGTTTTTAA10.20491803278688525No Hit
CAGCTGATGCACAATCGTTTTTAAA10.20491803278688525No Hit
CAGTCAGCTGATGCACAATCGTTTTTAA10.20491803278688525No Hit
ATAAGGGTTTGCGGTGTAAGTGCAGCC10.20491803278688525No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCGGTG10.20491803278688525No Hit
AATCGTTTTTAAACGGGTTTGCGATGTAAGTGC10.20491803278688525No Hit
TGTTTTTTAAACGGGTTTGCGGTGTA10.20491803278688525No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCGG10.20491803278688525No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGA10.20491803278688525No Hit
GCTGATGCACAATCGTTTTTAAACGGG10.20491803278688525No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGT10.20491803278688525No Hit
GCACAATCGTTTTTAAACGGGTTTG10.20491803278688525No Hit
TAGCTGATGCACAATCGTTTTTAAACGGG10.20491803278688525No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGC10.20491803278688525No Hit
TTGCACAATCGTTTTTAAACGGGTTTGC10.20491803278688525No Hit
GCACAATCGTTTTTAAACGGGTTTGCG10.20491803278688525No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGT10.20491803278688525No Hit
CAGCTGATGCACAATCGTTTTTAA10.20491803278688525No Hit
CTGATGCACAATCGTTTTTAAACGGGTTT10.20491803278688525No Hit
CAGTCAGCTGATGCACAATCGTTTTTAAAC10.20491803278688525No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCC10.20491803278688525No Hit
GCACAATCGTTTTTAATCGGGTTTGCGG10.20491803278688525No Hit
GTCAGCTGATGCACAATCGTTTTTATACGGG10.20491803278688525No Hit
CACAATCGTTTTTAAACGGGTTTGCGGTG10.20491803278688525No Hit
TCAGCTGATGCACAATCGTTTTTAAAC10.20491803278688525No Hit
TGATGCACAATCGTTTTTATAAGGG10.20491803278688525No Hit
TTTAAACGGGTTTGGGGTGTAAGT10.20491803278688525No Hit
AAAACGGGTTTGCGGTGTAAGTGCAG10.20491803278688525No Hit
TCAGTCAGCTGATGCACAATCGTTTTTAAACG10.20491803278688525No Hit
GCACAATCGTTTTTAAACGGGTTTGCGGT10.20491803278688525No Hit
AGCTGATGTACAATCGTTTTTAAA10.20491803278688525No Hit
GTTTTTAAACGGGTTTGCGGTGTAA10.20491803278688525No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTC10.20491803278688525No Hit
AGTCAGCTGATGCACAATCGTTTTTAAAC10.20491803278688525No Hit
ACAAGCGTTTTTAAACGGGTTTGCGATGT10.20491803278688525No Hit
AAACGGGTTTGCGGTGTAAGTGCA10.20491803278688525No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCC10.20491803278688525No Hit
TCAGCTAATGCACAATCGTTTTTAAACG10.20491803278688525No Hit
TCGGCTGATGCACAATCGTTTTTAAACGG10.20491803278688525No Hit
TGCACAATCGTTTTTAAACGGGTTT10.20491803278688525No Hit
AATCGTTTTTAAACGGGTTTGCGCT10.20491803278688525No Hit
TTTATAAGGGTTTGCGGTGTAAGTGCAGC10.20491803278688525No Hit
ATTGTTTTTAAACGGGTTTGCGGTGTAA10.20491803278688525No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTG10.20491803278688525No Hit
TGATGCACAATCGTTTCTAAACGGGTTTGCGGT10.20491803278688525No Hit
AACGGGTTTGCGGTGTAAGTACAGCCCGT10.20491803278688525No Hit
TGCACAATCGTTTTTAAACGGGTTTA10.20491803278688525No Hit
AATCGTTTTTAAAACGGGTTTGCGGTG10.20491803278688525No Hit
TAGCTGATGCACAATCGTTTTTAAACG10.20491803278688525No Hit
ACAATCGTTTTTAAACGGGTTTGC10.20491803278688525No Hit
CTTCAGTCAGCTGATGCACAATCGTTTTTAAAC10.20491803278688525No Hit
TCAGCTGATGCACAATCGTTTTTATAAGG10.20491803278688525No Hit
GTTTTTAAACGGGTTTGCGGTGTAAGTG10.20491803278688525No Hit
TTGATGCACAATCGTTTTTAAACGGGT10.20491803278688525No Hit
GTCAGCTGATGCACAATCGTTTTTAAACGG10.20491803278688525No Hit
CTGATGCACAATCGTTTTTAAACGGGTTTGCG10.20491803278688525No Hit
TGCACAATCGTTTTTATAAGGGTTTG10.20491803278688525No Hit
TCAGCTGATGCACAATCGTTTTTAAAGGGG10.20491803278688525No Hit
CAGTCAGCTGATGCACAATCGTTTTTATA10.20491803278688525No Hit
GTCAGCTGATGCACAATCGTTTTTAAAC10.20491803278688525No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAGTGC10.20491803278688525No Hit
TTGATGCACAATCGTTTTTATAAGGGTT10.20491803278688525No Hit
ACAATCGTTTTTATAAGGGTTTGCGG10.20491803278688525No Hit
TTTTTAAACGGGTTTGCGGTGTAAGCGCAG10.20491803278688525No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAA10.20491803278688525No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAGC10.20491803278688525No Hit
CACAATCGTTTTTAAACGGGTTTGCGGTGTAAG10.20491803278688525No Hit
CACAATCGTTTTTAAACGGGTTTGCGGT10.20491803278688525No Hit
CAGTCAGCTGATGCACAATCGTTTTTAAACGGG10.20491803278688525No Hit
CGTTTTTAAACGGGTTTGCGGTGTAAGTG10.20491803278688525No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCC10.20491803278688525No Hit
AACGGGTTTGCGGTGTAAGTGCAG10.20491803278688525No Hit
TCGATGCACAATCGTTTTTATAAGGGTTTG10.20491803278688525No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTT10.20491803278688525No Hit
TGCACAATCGTTTTTAAACGGGTTTGC10.20491803278688525No Hit
AGTCAGCTGATGCACAATAGTTTTTAAAC10.20491803278688525No Hit
AGCTGATGCACAATCGTTTTTAAT10.20491803278688525No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAGCC10.20491803278688525No Hit
GCTTCAGTCAGCTGATGCACTATCGTTTTTAAA10.20491803278688525No Hit
CAGTCAGCTGATGCACAATCGTTTTTAAACGG10.20491803278688525No Hit
TGCACAATCGTTTTTAAACGGGTTTGCGGTGT10.20491803278688525No Hit
TAGTCAGCTGATGCACAATCGTTTTTAAA10.20491803278688525No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCGGTGT10.20491803278688525No Hit
ACAATCGTTTTTAAAACGGGTTTGCGGTG10.20491803278688525No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCG10.20491803278688525No Hit
TTCAGCTGATGCACAATCGTTTTTAAACGGG10.20491803278688525No Hit
TAGCTGATGCACAATCGTTTTTAAAC10.20491803278688525No Hit
CTGATGCACAATCGTTTTTAAACGGGTT10.20491803278688525No Hit
AGCTGATGCACAATCGTTTTTAAAC10.20491803278688525No Hit
GAATCGTTTTTAAACGGGTTTGCGGTG10.20491803278688525No Hit
GTTTTTAAACGGGTTTGCGGTGTAAGTGC10.20491803278688525No Hit
GATGCACAATCGTTTTTATAAGGGTTTGCG10.20491803278688525No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGTAA10.20491803278688525No Hit
CAGCTGATGCACAATCGTTTTTAAACG10.20491803278688525No Hit
TGATGCACAATCGTTTTTATAAGGGTTTGC10.20491803278688525No Hit
TTTAAACGGGTTTGCGGTCTAAGT10.20491803278688525No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAA10.20491803278688525No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGT10.20491803278688525No Hit
CGTTTTTAAACGGGTTTGCGGTGTAAG10.20491803278688525No Hit
CTGATGCACAATCGTTTTTAAACGGGT10.20491803278688525No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGTAAG10.20491803278688525No Hit
GTTTTTAAAACGGGTTTGCGGTGTAAGT10.20491803278688525No Hit
TTTAAACGGGTTTGCGGTGTAAGTGC10.20491803278688525No Hit
GCTTCAGTCAGCTGATGCACAATCGTTTTTAAA10.20491803278688525No Hit
AATCGTTTTTAAACGGGTTTGTGG10.20491803278688525No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC10.20491803278688525No Hit
TCAGCTGATGCACAATCGTTTTCAAACGG10.20491803278688525No Hit
AATCGTTTTTAAACGGGTTTGTGGTGTAAGTGC10.20491803278688525No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTA10.20491803278688525No Hit
TAACGGGTTTGCGGTGTAAGTGCAGCC10.20491803278688525No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGT10.20491803278688525No Hit
ATGCACAATCGTTTTTATAAGGGTTT10.20491803278688525No Hit
TAATGGGTTTGCGGTGTAAGTGCAGCCCG10.20491803278688525No Hit
TTATAAGGGTTTGCGGTGTAAGTGC10.20491803278688525No Hit
GATGCACAATCGTTTTTATAAGGGTTTG10.20491803278688525No Hit
AAAACGGGTTTGCGGTGTAAGTACAGCCCGT10.20491803278688525No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)