FastQCFastQC Report
Wed 6 Sept 2023
SRR13777333.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13777333.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Total Bases1.4 kbp
Sequences flagged as poor quality0
Sequence length24-32
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AATCGTTTTTAAACGGGTTTGCGGTG611.320754716981133No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCG47.547169811320755No Hit
AATCGTTTTTAAACGGGTTTGCGG47.547169811320755No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGTAA23.7735849056603774No Hit
AATCGTTTTTAAACGGGTTTGCGGTGT11.8867924528301887No Hit
ATCGTTTTTAAACGGGTTTGCGGT11.8867924528301887No Hit
CGTTTTTAAACGGGTTTGCGGTGTAAGTG11.8867924528301887No Hit
AGCTGATGCACAATCGTTTTTAAACGGG11.8867924528301887No Hit
TTTAAACGGGTTTGCGGTGTAAGT11.8867924528301887No Hit
TCAATCGTTTTTAAACGGGTTTGCGGTGT11.8867924528301887No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCGG11.8867924528301887No Hit
TGCACAATCGTTTTTATAAGGGTTTG11.8867924528301887No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCG11.8867924528301887No Hit
AAATCGTTTTTAAACGGGTTTGCG11.8867924528301887No Hit
TTGATGCACAATCGTTTTTAAACGGGTTT11.8867924528301887No Hit
TCAGCTGATGCACAATCGTTTTTAAACGG11.8867924528301887No Hit
TTGATGCACAATCGTTTTTAAAACGGG11.8867924528301887No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAA11.8867924528301887No Hit
CTGATGCACAATCGTTTTTAAACGGGTTTG11.8867924528301887No Hit
GCTGATGCACAATCGTTTTTAAACGGGT11.8867924528301887No Hit
AATCGTTTTTAAACGGGTTTGCGGT11.8867924528301887No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTA11.8867924528301887No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAG11.8867924528301887No Hit
ACAATCGTTTTTAAACGGGTTTGCGGT11.8867924528301887No Hit
TCAGCTGATGCACAATCGTTTTTAAACGGG11.8867924528301887No Hit
GCACAATCGTTTTTAAACGGGTTTGCGGT11.8867924528301887No Hit
CTGATGCACAATCGTTTTTAAACG11.8867924528301887No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGT11.8867924528301887No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAG11.8867924528301887No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAG11.8867924528301887No Hit
AATCGTTTTTAAACGGGTTTGCGGCG11.8867924528301887No Hit
TTTTAAACGGGTTTGCGGTGTAAGTG11.8867924528301887No Hit
CAGCTGATGCACAATCGTTTTTAAA11.8867924528301887No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTG11.8867924528301887No Hit
ATAAGGGTTTGCGGTGTAAGTGCAGCC11.8867924528301887No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGTA11.8867924528301887No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTT11.8867924528301887No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTG11.8867924528301887No Hit
AATCGTTTTTAAATGGGTTTGCGGTGT11.8867924528301887No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC11.8867924528301887No Hit
TTGATGCACAATCGTTTTTAAACGGGT11.8867924528301887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)