FastQCFastQC Report
Wed 27 Sept 2023
SRR13777334.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13777334.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3421
Total Bases158.2 kbp
Sequences flagged as poor quality0
Sequence length34-95
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC2707.892429114294067No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC1684.910844782227419No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAG1153.3615901783104354No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC1043.040046769950307No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGG792.30926629640456No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC752.192341420637241No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC621.8123355743934522No Hit
AACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAAC511.4907921660333234No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC451.3154048523823443No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC411.198479976615025No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC401.169248757673195No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGT391.140017538731365No Hit
ACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACG381.1107863197895351No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC330.964630225080386No Hit
TCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGG330.964630225080386No Hit
ACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGG320.935399006138556No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC320.935399006138556No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC310.9061677871967261No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC310.9061677871967261No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC300.8769365682548963No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCG290.8477053493130663No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCAC290.8477053493130663No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC280.8184741303712365No Hit
ATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTA260.7600116924875767No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC240.7015492546039169No Hit
CCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGT240.7015492546039169No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC230.6723180356620871No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGG220.6430868167202572No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC200.5846243788365975No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGC200.5846243788365975No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCG190.5553931598947676No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC190.5553931598947676No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTG170.4969307220111079No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC170.4969307220111079No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC160.467699503069278No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGT160.467699503069278No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCAC150.43846828412744815No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGT150.43846828412744815No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCA150.43846828412744815No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGC150.43846828412744815No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCA140.40923706518561825No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCG140.40923706518561825No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTG130.38000584624378836No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCG130.38000584624378836No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC130.38000584624378836No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC130.38000584624378836No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGT130.38000584624378836No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGG130.38000584624378836No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC130.38000584624378836No Hit
CTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGG120.35077462730195846No Hit
TTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC120.35077462730195846No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCG120.35077462730195846No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCAC120.35077462730195846No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCAC110.3215434083601286No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC110.3215434083601286No Hit
CCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTG110.3215434083601286No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTG110.3215434083601286No Hit
CCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGT110.3215434083601286No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAG100.29231218941829873No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGC100.29231218941829873No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC100.29231218941829873No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC100.29231218941829873No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCG100.29231218941829873No Hit
GCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTT90.2630809704764689No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC80.233849751534639No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTA80.233849751534639No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC80.233849751534639No Hit
ATCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTA80.233849751534639No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC80.233849751534639No Hit
TTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACA80.233849751534639No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGTCCGTCTTAC70.20461853259280913No Hit
TTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC70.20461853259280913No Hit
TGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC70.20461853259280913No Hit
TCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAA70.20461853259280913No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC70.20461853259280913No Hit
GTGATCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTT70.20461853259280913No Hit
GTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGG70.20461853259280913No Hit
CTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC70.20461853259280913No Hit
AACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCG70.20461853259280913No Hit
TGTGATCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTT60.17538731365097923No Hit
CGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC60.17538731365097923No Hit
GCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC60.17538731365097923No Hit
AAACGGGTTTGCGGTGTAAGTGTAGCCCGTCTTAC60.17538731365097923No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC60.17538731365097923No Hit
GTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC60.17538731365097923No Hit
TCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC60.17538731365097923No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC60.17538731365097923No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTA60.17538731365097923No Hit
TGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC60.17538731365097923No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC60.17538731365097923No Hit
ACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAAC60.17538731365097923No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC60.17538731365097923No Hit
ATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAAC60.17538731365097923No Hit
TGATCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTT50.14615609470914936No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC50.14615609470914936No Hit
ATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGT50.14615609470914936No Hit
CATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGT50.14615609470914936No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC50.14615609470914936No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAT50.14615609470914936No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC50.14615609470914936No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC50.14615609470914936No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC50.14615609470914936No Hit
TTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTG50.14615609470914936No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCG50.14615609470914936No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC50.14615609470914936No Hit
AAAACGGGTTTGCGGTGTAAGTACAGCCCGTCTTAC50.14615609470914936No Hit
TGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCT40.1169248757673195No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGG40.1169248757673195No Hit
CGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTT40.1169248757673195No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGG40.1169248757673195No Hit
AAAACGGGTTTGTGGTGTAAGTGCAGCCCGTCTTAC40.1169248757673195No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC40.1169248757673195No Hit
AAGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCA40.1169248757673195No Hit
AGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGT40.1169248757673195No Hit
AAGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC40.1169248757673195No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACA40.1169248757673195No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC40.1169248757673195No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC40.1169248757673195No Hit
TGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAA40.1169248757673195No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC40.1169248757673195No Hit
TTGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC40.1169248757673195No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC40.1169248757673195No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTTTGCG40.1169248757673195No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)