FastQCFastQC Report
Wed 6 Sept 2023
SRR13777335.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13777335.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3462
Total Bases160.2 kbp
Sequences flagged as poor quality0
Sequence length34-87
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC2868.261120739456961No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC1604.62160600808781No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAG1133.264009243212016No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC1032.975158867706528No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC802.310803004043905No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGG792.2819179664933564No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC581.6753321779318313No Hit
AACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAAC571.6464471403812824No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGT481.386481802426343No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC471.3575967648757943No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC471.3575967648757943No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC441.270941652224148No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC421.2131715771230502No Hit
ACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACG371.0687463893703062No Hit
ACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGG340.9820912767186597No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC340.9820912767186597No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC340.9820912767186597No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCAC330.9532062391681109No Hit
TCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGG320.924321201617562No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC280.8087810514153668No Hit
ATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTA270.779896013864818No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCG260.7510109763142693No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC260.7510109763142693No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC250.7221259387637204No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC240.6932409012131715No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGG240.6932409012131715No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTG230.6643558636626228No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC230.6643558636626228No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC230.6643558636626228No Hit
CCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGT210.6065857885615251No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC200.5777007510109763No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGG200.5777007510109763No Hit
TCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC200.5777007510109763No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGC200.5777007510109763No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCG190.5488157134604276No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCA180.5199306759098787No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC170.49104563835932985No Hit
CCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTG160.462160600808781No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCA160.462160600808781No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGT160.462160600808781No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGCAC150.43327556325823224No Hit
TTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC150.43327556325823224No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC150.43327556325823224No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTG150.43327556325823224No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCG150.43327556325823224No Hit
CTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGG140.4043905257076834No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGT130.37550548815713464No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGT130.37550548815713464No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGC130.37550548815713464No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC120.34662045060658575No Hit
ATCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTA120.34662045060658575No Hit
ATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAAC120.34662045060658575No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTG110.317735413056037No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC110.317735413056037No Hit
ATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC110.317735413056037No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC110.317735413056037No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCAC110.317735413056037No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAG100.28885037550548814No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC100.28885037550548814No Hit
GCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTT100.28885037550548814No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCG100.28885037550548814No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC100.28885037550548814No Hit
AAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCAC90.25996533795493937No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCG90.25996533795493937No Hit
TTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC90.25996533795493937No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCG90.25996533795493937No Hit
ATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTA90.25996533795493937No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGGC90.25996533795493937No Hit
CCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGT90.25996533795493937No Hit
ATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGT80.2310803004043905No Hit
TGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC80.2310803004043905No Hit
CTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC80.2310803004043905No Hit
TTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACA80.2310803004043905No Hit
TGTGATCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTT70.2021952628538417No Hit
CATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGT70.2021952628538417No Hit
AAAACGGGTTTGTGGTGTAAGTGCAGCCCGTCTTAC70.2021952628538417No Hit
TCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAA70.2021952628538417No Hit
AAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC70.2021952628538417No Hit
CAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAA70.2021952628538417No Hit
TGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC70.2021952628538417No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTT70.2021952628538417No Hit
AACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCG70.2021952628538417No Hit
AAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTA60.17331022530329288No Hit
AAACGGGTTTGCGGTGTAAGTGTAGCCCGTCTTAC60.17331022530329288No Hit
GTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC60.17331022530329288No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC60.17331022530329288No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC60.17331022530329288No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC60.17331022530329288No Hit
AATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC60.17331022530329288No Hit
GTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGG60.17331022530329288No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCG60.17331022530329288No Hit
AAACGGGTTTGTGGTGTAAGTGCAGCCCGTCTTAC60.17331022530329288No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC60.17331022530329288No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC50.14442518775274407No Hit
TGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCT50.14442518775274407No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC50.14442518775274407No Hit
GCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC50.14442518775274407No Hit
CGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC50.14442518775274407No Hit
AAACGGGTTTGCGGTGTAAGTACAGCCCGTCTTAC50.14442518775274407No Hit
TCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC50.14442518775274407No Hit
ATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAA50.14442518775274407No Hit
TTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGC50.14442518775274407No Hit
TTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC50.14442518775274407No Hit
ATAAGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGGCACAGG50.14442518775274407No Hit
TTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACAC50.14442518775274407No Hit
TTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTG50.14442518775274407No Hit
AACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC50.14442518775274407No Hit
AAAACGGGTTTGCGGTGTAAGTACAGCCCGTCTTAC50.14442518775274407No Hit
CGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAACGGGTT40.11554015020219525No Hit
TCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCC40.11554015020219525No Hit
CGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC40.11554015020219525No Hit
AAACGGGTTTGCGGTGTAAGTGCAGTCCGTCTTACACCGTGCGGCACAGG40.11554015020219525No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGCGG40.11554015020219525No Hit
ACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC40.11554015020219525No Hit
GTGATCAACTCCGCGAACCCATGCTTCAGTCAGCTGATGCACAATCGTTT40.11554015020219525No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC40.11554015020219525No Hit
AGTCAGCTGATGCACAATCGTTTTTAAACGGGTTTGCGGTGT40.11554015020219525No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC40.11554015020219525No Hit
ACCCATGCTTCAGTCAGCTGATGCACAATCGTTTTTAAAC40.11554015020219525No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCGTGC40.11554015020219525No Hit
ACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACCG40.11554015020219525No Hit
TTGCACAATCGTTTTTAAACGGGTTTGCGGTGTAAGTGC40.11554015020219525No Hit
TAAACGGGTTTGCGGTGTAAGTGCAGCCCGTCTTACACC40.11554015020219525No Hit
AGCTGATGCACAATCGTTTTTAAACGGGTTTGCG40.11554015020219525No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)