FastQCFastQC Report
Wed 6 Sept 2023
SRR13777337.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13777337.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2103
Total Bases58.1 kbp
Sequences flagged as poor quality0
Sequence length24-33
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGATGCACAATCGTTTTTATAAGGGTTTG1225.801236329053733No Hit
TGATGCACAATCGTTTTTATAAGGGTTTG1085.1355206847360915No Hit
ATGCACAATCGTTTTTATAAGGGTTTG1014.802662862577271No Hit
GATGCACAATCGTTTTTATAAGGGTTTG864.0893961008083695No Hit
AATCGTTTTTATAAGGGTTTGCGG532.5202092249167856No Hit
AGCTGATGCACAATCGTTTTTATAAGGG482.282453637660485No Hit
ATGCACAATCGTTTTTATAAGGGTTTGC482.282453637660485No Hit
AGCTGATGCACAATCGTTTTTATAAG442.0922491678554445No Hit
TTGATGCACAATCGTTTTTATAAGGG361.7118402282453637No Hit
ACAATCGTTTTTATAAGGGTTTGCGGTG351.6642891107941038No Hit
TGCACAATCGTTTTTATAAGGGTTTG291.378982406086543No Hit
TGATGCACAATCGTTTTTATAAGGGTTTGC281.331431288635283No Hit
AGCTGATGCACAATCGTTTTTATAA271.2838801711840229No Hit
TGCACAATCGTTTTTATAAGGGTTTGCGGT241.1412268188302426No Hit
TTGATGCACAATCGTTTTTATAAGGGTTT231.0936757013789824No Hit
TGATGCACAATCGTTTTTATAAGGG231.0936757013789824No Hit
AGCTGATGCACAATCGTTTTTATAAGGGT231.0936757013789824No Hit
ACAATCGTTTTTATAAGGGTTTGCGGT210.9985734664764622No Hit
AGCTGATGCACAATCGTTTTTATAAGG210.9985734664764622No Hit
TTGATGCACAATCGTTTTTATAAGGGTTTGC210.9985734664764622No Hit
GCACAATCGTTTTTATAAGGGTTTG200.9510223490252021No Hit
ACAATCGTTTTTATAAGGGTTTGCGG200.9510223490252021No Hit
TTTATAAGGGTTTGCGGTGTAAGTGC190.9034712315739419No Hit
TGCACAATCGTTTTTATAAGGGTTTGCGG190.9034712315739419No Hit
TTGATGCACAATCGTTTTTATAAGG180.8559201141226819No Hit
TGATGCACAATCGTTTTTATAAGG170.8083689966714217No Hit
AATCGTTTTTATAAGGGTTTGCGGTG160.7608178792201616No Hit
GATGCACAATCGTTTTTATAAGGG160.7608178792201616No Hit
TTGATGCACAATCGTTTTTATAAGGGTT160.7608178792201616No Hit
TTTATAAGGGTTTGCGGTGTAAGTGCAG150.7132667617689016No Hit
GATGCACAATCGTTTTTATAAGGGTTTGC150.7132667617689016No Hit
AATCGTTTTTATAAGGGTTTGCGGT150.7132667617689016No Hit
TGCACAATCGTTTTTATAAGGGTTTGC150.7132667617689016No Hit
ACAATCGTTTTTATAAGGGTTTGC150.7132667617689016No Hit
TGATGCACAATCGTTTTTATAAGGGT140.6657156443176415No Hit
ACAATCGTTTTTATAAGGGTTTGCG130.6181645268663813No Hit
TTGATGCACAATCGTTTTTATAAGGGT130.6181645268663813No Hit
AAATCGTTTTTATAAGGGTTTGCGG130.6181645268663813No Hit
CACAATCGTTTTTATAAGGGTTTGCGG130.6181645268663813No Hit
ATGCACAATCGTTTTTATAAGGGTTTGCG120.5706134094151213No Hit
TGATGCACAATCGTTTTTATAAGGGTTT120.5706134094151213No Hit
TTTATAAGGGTTTGCGGTGTAAGTG120.5706134094151213No Hit
ACAATCGTTTTTATAAGGGTTTGCGGTGT120.5706134094151213No Hit
TTTATAAGGGTTTGCGGTGTAAGT110.5230622919638611No Hit
AGTCAGCTGATGCACAATCGTTTTTATAAGGG110.5230622919638611No Hit
ATCGTTTTTATAAGGGTTTGCGGTG110.5230622919638611No Hit
TTGATGCACAATCGTTTTTATAAGGGTTTGCG100.47551117451260105No Hit
TGATGCACAATCGTTTTTATAAGGGTTTGCG100.47551117451260105No Hit
AGTCAGCTGATGCACAATCGTTTTTATAAG100.47551117451260105No Hit
ATGCACAATCGTTTTTATAAGGGTT100.47551117451260105No Hit
ATGCACAATCGTTTTTATAAGGGTTT100.47551117451260105No Hit
TTTTATAAGGGTTTGCGGTGTAAGTGC90.42796005706134094No Hit
ATGCACAATCGTTTTTATAAGGGT90.42796005706134094No Hit
TGCACAATCGTTTTTATAAGGGTTTGCG90.42796005706134094No Hit
TTATAAGGGTTTGCGGTGTAAGTGCAG90.42796005706134094No Hit
GATGCACAATCGTTTTTATAAGGGTTTGCG90.42796005706134094No Hit
CACAATCGTTTTTATAAGGGTTTG90.42796005706134094No Hit
AAATCGTTTTTATAAGGGTTTGCG80.3804089396100808No Hit
ATAAGGGTTTGCGGTGTAAGTGCAG80.3804089396100808No Hit
GCACAATCGTTTTTATAAGGGTTTGCGGT80.3804089396100808No Hit
AGCTGATGCACAATCGTTTTTATAAGGGTTTG80.3804089396100808No Hit
TTTTATAAGGGTTTGCGGTGTAAG80.3804089396100808No Hit
CTGATGCACAATCGTTTTTATAAGGG80.3804089396100808No Hit
CACAATCGTTTTTATAAGGGTTTGC70.33285782215882076No Hit
TTATAAGGGTTTGCGGTGTAAGTGCAGC70.33285782215882076No Hit
GCACAATCGTTTTTATAAGGGTTTGC70.33285782215882076No Hit
TTTTATAAGGGTTTGCGGTGTAAGTGCA70.33285782215882076No Hit
ATAAGGGTTTGCGGTGTAAGTGCAGC70.33285782215882076No Hit
CACAATCGTTTTTATAAGGGTTTGCGGT70.33285782215882076No Hit
TTGATGCACAATCGTTTTTATAAGGGTTTGCGG70.33285782215882076No Hit
CTGATGCACAATCGTTTTTATAAGGGTTTG70.33285782215882076No Hit
TTGCACAATCGTTTTTATAAGGGTTTGCGG70.33285782215882076No Hit
TTTTATAAGGGTTTGCGGTGTAAGTGCAG70.33285782215882076No Hit
TCAGCTGATGCACAATCGTTTTTATAAGGG70.33285782215882076No Hit
TTTTATAAGGGTTTGCGGTGTAAGT70.33285782215882076No Hit
TCACAATCGTTTTTATAAGGGTTTGCGG60.28530670470756064No Hit
GCTGATGCACAATCGTTTTTATAA60.28530670470756064No Hit
AAATCGTTTTTATAAGGGTTTGCGGT60.28530670470756064No Hit
AGTCAGCTGATGCACAATCGTTTTTATAAGG60.28530670470756064No Hit
ATGCACAATCGTTTTTATAAGGGTTTGCGG60.28530670470756064No Hit
GATGCACAATCGTTTTTATAAGGGTTT60.28530670470756064No Hit
GATGCACAATCGTTTTTATAAGGGT60.28530670470756064No Hit
AATCGTTTTTATAAGGGTTTGCGGTGTAAGT60.28530670470756064No Hit
TATAAGGGTTTGCGGTGTAAGTGC60.28530670470756064No Hit
TTGCACAATCGTTTTTATAAGGGTTTG60.28530670470756064No Hit
CAGTCAGCTGATGCACAATCGTTTTTATAAGGG60.28530670470756064No Hit
TATAAGGGTTTGCGGTGTAAGTGCAG60.28530670470756064No Hit
AGTCAGCTGATGCACAATCGTTTTTATAA60.28530670470756064No Hit
TGATGCACAATCGTTTTTATAAGGGTT50.23775558725630053No Hit
GATGCACAATCGTTTTTATAAGGGTT50.23775558725630053No Hit
AGCTGATGCACAATCGTTTTTATA50.23775558725630053No Hit
TTTTTATAAGGGTTTGCGGTGTAAGTG50.23775558725630053No Hit
TTTATAAGGGTTTGCGGTGTAAGTGCAGC50.23775558725630053No Hit
ATCGTTTTTATAAGGGTTTGCGGTGTAAG50.23775558725630053No Hit
TCAGCTGATGCACAATCGTTTTTATAAGG50.23775558725630053No Hit
TTTATAAGGGTTTGCGGTGTAAGTGCA50.23775558725630053No Hit
AAGGGTTTGCGGTGTAAGTGCAGC50.23775558725630053No Hit
TCACAATCGTTTTTATAAGGGTTTGCGGT50.23775558725630053No Hit
AGCTGATGCACAATCGTTTTTATAAGGGTTTGC50.23775558725630053No Hit
AGTCAGCTGATGCACAATCGTTTTTAT50.23775558725630053No Hit
TCGTTTTTATAAGGGTTTGCGGTG50.23775558725630053No Hit
ATAAGGGTTTGCGGTGTAAGTGCA50.23775558725630053No Hit
AATCGTTTTTATAAGGGTTTGCGGTGT40.1902044698050404No Hit
TGCACAATCGTTTTTATAAGGGTTT40.1902044698050404No Hit
TTCAGTCAGCTGATGCACAATCGTTTTTATAAG40.1902044698050404No Hit
CACAATCGTTTTTATAAGGGTTTGCGGTG40.1902044698050404No Hit
AATCGTTTTTATAAGGGTTTGCGGTGTAAG40.1902044698050404No Hit
TTTTATAAGGGTTTGCGGTGTAAGTG40.1902044698050404No Hit
ATCGTTTTTATAAGGGTTTGCGGT40.1902044698050404No Hit
GTCAGCTGATGCACAATCGTTTTTATAAGGG40.1902044698050404No Hit
GCACAATCGTTTTTATAAGGGTTT40.1902044698050404No Hit
GTCAGCTGATGCACAATCGTTTTTATAAG40.1902044698050404No Hit
GCACAATCGTTTTTATAAGGGTTTGCGG40.1902044698050404No Hit
TGCACAATCGTTTTTATAAGGGTTTGCGGTGT40.1902044698050404No Hit
GCTGATGCACAATCGTTTTTATAAGGG40.1902044698050404No Hit
TATAAGGGTTTGCGGTGTAAGTGCAGC40.1902044698050404No Hit
GCTGATGCACAATCGTTTTTATAAGG40.1902044698050404No Hit
AATCGTTTTTATAAGGGTTTGCGGTGTAAGTGC40.1902044698050404No Hit
TTTTTATAAGGGTTTGCGGTGTAAGTGCA40.1902044698050404No Hit
TTATAAGGGTTTGCGGTGTAAGTGC40.1902044698050404No Hit
TTGCACAATCGTTTTTATAAGGGTTTGCGGT30.14265335235378032No Hit
GCTGATGCACAATCGTTTTTATAAGGGTT30.14265335235378032No Hit
CAGCTGATGCACAATCGTTTTTATAA30.14265335235378032No Hit
GATGCACAATCGTTTTTATAAGGGTTTGCGG30.14265335235378032No Hit
TTGATGCACAATCGTTTTTATAAG30.14265335235378032No Hit
TCAGCTGATGCACAATCGTTTTTATAAGGGT30.14265335235378032No Hit
AGCTGATGCACAATCGTTTTTATAAGGGTTT30.14265335235378032No Hit
TTTTTATAAGGGTTTGCGGTGTAAGTGC30.14265335235378032No Hit
TCAGCTGATGCACAATCGTTTTTATAA30.14265335235378032No Hit
GTCAGCTGATGCACAATCGTTTTTATAAGGGT30.14265335235378032No Hit
TGATGCACAATCGTTTTTATAAGGGTTTGCGG30.14265335235378032No Hit
AGTCAGCTGATGCACAATCGTTTTTATA30.14265335235378032No Hit
TTTTTATAAGGGTTTGCGGTGTAAGT30.14265335235378032No Hit
CTGATGCACAATCGTTTTTATAAGGGTTTGCG30.14265335235378032No Hit
CTGATGCACAATCGTTTTTATAAGG30.14265335235378032No Hit
CAGTCAGCTGATGCACAATCGTTTTTATAAGG30.14265335235378032No Hit
TCAGCTGATGCACAATCGTTTTTATAAG30.14265335235378032No Hit
TAAGGGTTTGCGGTGTAAGTGCAGC30.14265335235378032No Hit
ATCGTTTTTATAAGGGTTTGCGGTGT30.14265335235378032No Hit
TTTTATAAGGGTTTGCGGTGTAAGTGCAGC30.14265335235378032No Hit
TTGCACAATCGTTTTTATAAGGGTTTGC30.14265335235378032No Hit
CACAATCGTTTTTATAAGGGTTTGCG30.14265335235378032No Hit
TGCACAATCGTTTTTATAAGGGTTTGCGGTG30.14265335235378032No Hit
CGTTTTTATAAGGGTTTGCGGTGTAAGTGC30.14265335235378032No Hit
AGCTGATGCACAATCGTTTTTATAAGGGTT30.14265335235378032No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)