FastQCFastQC Report
Wed 6 Sept 2023
SRR13777339.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13777339.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences262
Total Bases7.2 kbp
Sequences flagged as poor quality0
Sequence length24-33
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGATGCACAATCGTTTTTATAAGGGTTTG207.633587786259542No Hit
AGCTGATGCACAATCGTTTTTATAAGGG134.961832061068702No Hit
TGATGCACAATCGTTTTTATAAGGGTTTG124.580152671755725No Hit
ATGCACAATCGTTTTTATAAGGGTTTG83.0534351145038165No Hit
ATGCACAATCGTTTTTATAAGGGTTTGC72.6717557251908395No Hit
ACAATCGTTTTTATAAGGGTTTGCGGTG62.2900763358778624No Hit
GATGCACAATCGTTTTTATAAGGGTTTG62.2900763358778624No Hit
AATCGTTTTTATAAGGGTTTGCGG51.9083969465648856No Hit
TGCACAATCGTTTTTATAAGGGTTTG41.5267175572519083No Hit
TGCACAATCGTTTTTATAAGGGTTTGC41.5267175572519083No Hit
GCACAATCGTTTTTATAAGGGTTTG41.5267175572519083No Hit
AGCTGATGCACAATCGTTTTTATAAGG41.5267175572519083No Hit
TTGATGCACAATCGTTTTTATAAGGG41.5267175572519083No Hit
TGATGCACAATCGTTTTTATAAGGGTTTGC41.5267175572519083No Hit
TTGATGCACAATCGTTTTTATAAGG41.5267175572519083No Hit
TTTTATAAGGGTTTGCGGTGTAAGTGCAG41.5267175572519083No Hit
AGCTGATGCACAATCGTTTTTATAA31.1450381679389312No Hit
AAATCGTTTTTATAAGGGTTTGCG31.1450381679389312No Hit
ACAATCGTTTTTATAAGGGTTTGC31.1450381679389312No Hit
TTGATGCACAATCGTTTTTATAAGGGTTT31.1450381679389312No Hit
ATGCACAATCGTTTTTATAAGGGT31.1450381679389312No Hit
AGCTGATGCACAATCGTTTTTATAAGGGT31.1450381679389312No Hit
TTATAAGGGTTTGCGGTGTAAGTGC31.1450381679389312No Hit
AGCTGATGCACAATCGTTTTTATAAG31.1450381679389312No Hit
GTTTTTATAAGGGTTTGCGGTGTAAGTG20.7633587786259541No Hit
ACAATCGTTTTTATAAGGGTTTGCGG20.7633587786259541No Hit
ACAATCGTTTTTATAAGGGTTTGCGGT20.7633587786259541No Hit
TTTATAAGGGTTTGCGGTGTAAGTGCAG20.7633587786259541No Hit
TGCACAATCGTTTTTATAAGGGTTTGCGGT20.7633587786259541No Hit
TTTATAAGGGTTTGCGGTGTAAGT20.7633587786259541No Hit
AAATCGTTTTTATAAGGGTTTGCGG20.7633587786259541No Hit
TTTTTATAAGGGTTTGCGGTGTAAGT20.7633587786259541No Hit
TGCACAATCGTTTTTATAAGGGTTTGCG20.7633587786259541No Hit
TGCACAATCGTTTTTATAAGGGTTTGCGG20.7633587786259541No Hit
ACAATCGTTTTTATAAGGGTTTGCGGTGT20.7633587786259541No Hit
TCAGCTGATGCACAATCGTTTTTATAAG20.7633587786259541No Hit
CTGATGCACAATCGTTTTTATAAGGGT20.7633587786259541No Hit
CTGATGCACAATCGTTTTTATAAGGGTTTG20.7633587786259541No Hit
TGATGCACAATCGTTTTTATAAGGG20.7633587786259541No Hit
TATAAGGGTTTGCGGTGTAAGTGC20.7633587786259541No Hit
ATGCACAATCGTTTTTATAAGGGTTTGCGG20.7633587786259541No Hit
CAATCGTTTTTATAAGGGTTTGCGG20.7633587786259541No Hit
AGCTGATGCACAATCGTTTTTATAAGGGTTTG20.7633587786259541No Hit
TTTATAAGGGTTTGCGGTGTAAGTGCAGC20.7633587786259541No Hit
TCAGCTGATGCACAATCGTTTTTATAAGGG20.7633587786259541No Hit
ACAATCGTTTTTATAAGGGTTTGCG10.38167938931297707No Hit
TAGCTGATGCACAATCGTTTTTATAAGGG10.38167938931297707No Hit
AATCGTTTTTATAAGGGTTTGCGGTGT10.38167938931297707No Hit
CACAATCGTTTTTATAAGGGTTTGCGGT10.38167938931297707No Hit
AATCGTTTTTATAAGGGTTTGCGGTG10.38167938931297707No Hit
GTTTTTATAAGGGTTTGCGGTGTAAGTGC10.38167938931297707No Hit
TTTATAAGGGTTTGCGGTGTAAGTGCA10.38167938931297707No Hit
TCAGCTGATGTACAATCGTTTTTATAAGGGTTT10.38167938931297707No Hit
CAGCTGATGCACAATCGTTTTTATAA10.38167938931297707No Hit
GATGCACAATCGTTTTTATAAGGGTTTGCGG10.38167938931297707No Hit
AAATCGTTTTTATAAGGGTTTGCGGT10.38167938931297707No Hit
AATCGTTTTTATAAGGGTTTGCGGTGTAAG10.38167938931297707No Hit
TTTATAAGGGTTTGCAGTGTAAGTGCA10.38167938931297707No Hit
TTGATGCACAATCGTTTTTATAAGGGT10.38167938931297707No Hit
TTTTATAAGGGTTTGCGGTGTAAGTG10.38167938931297707No Hit
TCACAATCGTTTTTATAAGGGTTTGCG10.38167938931297707No Hit
AGTCAGCTGATGCACAATCGTTTTTATA10.38167938931297707No Hit
TTGATTCACAATCGTTTTTATAAGG10.38167938931297707No Hit
TTGATGCACAATCGTTTTTATAAGGGTTTGCGG10.38167938931297707No Hit
GATGCACAATCGTTTTTATAAGGGT10.38167938931297707No Hit
CAGCTGATGCACAATCGTTTTTATAAG10.38167938931297707No Hit
ACAATCGTTTTTATAAGGGTTTGCGGTGTAAGT10.38167938931297707No Hit
ATGCACAATCGTTTTTATAAGGGTT10.38167938931297707No Hit
TCAATCGTTTTTATAAGGGTTTGCGGT10.38167938931297707No Hit
TTGATGCACAATCGTTTTTATAAGGGTTTGCG10.38167938931297707No Hit
ATGCACAATCGTTTTTATAAGGGTTTGCG10.38167938931297707No Hit
CAGCTGATGCACAATCGTTTTTATAAGG10.38167938931297707No Hit
TTTTATAAGGGTTTGCGGTGTAAGTGC10.38167938931297707No Hit
ATCGTTTTTATAAGGGTTTGCGGTG10.38167938931297707No Hit
CTGATGCACAATCGTTTTTATAAGG10.38167938931297707No Hit
AATAAGGGTTTGCGGTGTAAGTGCAG10.38167938931297707No Hit
TCAGCTGATGCACAATCGTTTTTATAAGGGT10.38167938931297707No Hit
ATACACAATCGTTTTTATAAGGGTTTG10.38167938931297707No Hit
CAGTCAGCTGATGCACAATCGTTTTTATAAGG10.38167938931297707No Hit
CAGTCAGCTGATGCACAATCGTTTTTATAAG10.38167938931297707No Hit
GATGCACAATCGTTTTTATAAGGGTT10.38167938931297707No Hit
ATAAGGGTTTGCGGTGTAAGTGCAG10.38167938931297707No Hit
GGATGCACAATCGTTTTTATAAGGGTTTGC10.38167938931297707No Hit
GATGCACAATCGTTTTTATAGGGGTTTG10.38167938931297707No Hit
TGATGCACAATCGTTTTTATAAGG10.38167938931297707No Hit
GCACAATCGTTTTTATAAGGGTTTGC10.38167938931297707No Hit
GCTGATGCACAATCGTTTTTATAAGGGTTTGC10.38167938931297707No Hit
TTAAACGGGTTTGCGGTGTAAGTGCAG10.38167938931297707No Hit
TGATGCACAATCGTTTTTATAAGGGTTTGCG10.38167938931297707No Hit
TTTATAAGGGTTTGTGGTGTAAGTGCAGC10.38167938931297707No Hit
AAGGGTTTGCGGTGTAAGTGCAGCCCGTCTTAC10.38167938931297707No Hit
TCTTTATAAGGGTTTGCGGTGTAAGT10.38167938931297707No Hit
TTTTATAAGGGTTTGCGGTGTAAGTGCA10.38167938931297707No Hit
CAGCTGATGCACAATCGTTTTTATAAGGGTTT10.38167938931297707No Hit
AATCGTTTTTATAAGGGTTTGCGGTGTAAGT10.38167938931297707No Hit
ATAAGGGTTTGCGGTGTAAGTGCAGCCC10.38167938931297707No Hit
TTGCACAATCGTTTTTATAAGGGTTTGCGG10.38167938931297707No Hit
GCACAATCGTTTTTATAAGGGTTTGCGGT10.38167938931297707No Hit
TGATGCACAATCGTTTTTATAAGGGTTT10.38167938931297707No Hit
ATAAGGGTTTGCGGTGTAAGTGCAGC10.38167938931297707No Hit
CGATGCACAATCGTTTTTATAAGGGTTTG10.38167938931297707No Hit
TTTTTATAAGGGTTTGCGGTGTAAG10.38167938931297707No Hit
TTGATACACAATCGTTTTTATAAGGGTTTG10.38167938931297707No Hit
AAGGGTTTGCGGTGTAAGTGCAGCCC10.38167938931297707No Hit
GATGCACAATTGTTTTTATAAGGGTTT10.38167938931297707No Hit
TCAGCTGATGCACAATCGTTTTTATATGGG10.38167938931297707No Hit
GCACAATCGTTTTTATAAGGGTTTGCGG10.38167938931297707No Hit
GTCAGCTGATGCACAATCGTTTTTATAA10.38167938931297707No Hit
AGCTTTGTAATAGTCATAGAGGAT10.38167938931297707No Hit
TAGCTGATGCACAATCGTTTTTATAAGGGT10.38167938931297707No Hit
TGCACAATCGTTTTTATAAGGGTTTGCGGTG10.38167938931297707No Hit
TTTATAAGGGTTTGCGGCGTAAGTGCAGC10.38167938931297707No Hit
TTGCACAATCGTTTTTATAAGGGTTTG10.38167938931297707No Hit
AAATCGTTTTTATAAGGGTTTGCGGTGTAAG10.38167938931297707No Hit
TTGATGCACAATCGTTTTTATAAGGGTTTGC10.38167938931297707No Hit
AGCTGATGCACAATCGTTTTTATAAGGGTTT10.38167938931297707No Hit
TCACAATCGTTTTTATAAGGGTTTG10.38167938931297707No Hit
TATGCACAATCGTTTTTATAAGGGTTTGC10.38167938931297707No Hit
ATGCACAATCGTTTTTATAAGGGTTT10.38167938931297707No Hit
GCACAATCGTTTTTATAAGGGTTTGCG10.38167938931297707No Hit
CGTTTTTATAAGGGTTTGCGGTGTAAGTGC10.38167938931297707No Hit
TCACAATCGTTTTTATAAGGGTTTGCGGTG10.38167938931297707No Hit
CGTTTTTATAAGGGTTTGCGGTGT10.38167938931297707No Hit
TAGATGCACAATCGTTTTTATAAGGGTTTG10.38167938931297707No Hit
GATGCACAATCGTTTTTATAAGGG10.38167938931297707No Hit
CACAATCGTTTTTATAAGGGTTTG10.38167938931297707No Hit
TTTTATAAGGGTTTGCGGTGTAAGT10.38167938931297707No Hit
TATAAGGGTTTGCGGTGTAAGTGCAG10.38167938931297707No Hit
TTGATGCACAATCGTTTTTATAAGTGTT10.38167938931297707No Hit
CAATCGTTTTTAAACGGGTTTGCGGTGT10.38167938931297707No Hit
CAGCTGATGCACAATCGTTTTTATAAGGG10.38167938931297707No Hit
AGTCAGCTGATGCACAATCGTTTTTATAA10.38167938931297707No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)