FastQCFastQC Report
Fri 1 Sept 2023
SRR13808021_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13808021_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8266927
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length158
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGGAGCGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCG803390.9718121376903412No Hit
CCCGGAGCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGA739410.8944194136466912No Hit
CCCGGAGCGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGAC507650.6140734035754761No Hit
CCCGGAGCACGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTC462590.559567055569742No Hit
CCCGGAGCATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGACG421540.5099113612591475No Hit
CCCGGAGCCCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGC282410.34161424190633355No Hit
CCCGGAGCCCGGGCGACGTACCAGATTACGCTCCGGGCGACGTACCAGAT244180.2953697304935679No Hit
CCCCGGAGGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCG200230.24220608213910683No Hit
CCCCGGAGAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGA185820.22477517945906625No Hit
CCCGGAGCAGATTACGCTCCGGGATCGTCTCCGACACTAGTTAGCGTGCG156970.1898770849192209No Hit
CCCGGCTGCCGGGATCGTCTCCGACACTAGTTAGCGTGCGGCTGTCTCTT140060.16942208392550218No Hit
CCGGAGCGGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCG130600.15797889590654424No Hit
GTCTCTTACGTCTCCGACACTAGTTAGCGTGCGGCTGTCTCTTATACACA129780.15698699165965782No Hit
CCCCGGAGGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGAC129380.15650313592946932No Hit
CCGGAGCGAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGA122210.1478300219658405No Hit
CCCGGAGCTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGG120660.14595508101136007No Hit
CCCGGAGCGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGACGTACCA113720.13756018409258966No Hit
TCCCGGAGGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCG111880.13533444773372258No Hit
CCCCGGAGACGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTC111730.1351530018349019No Hit
CCCGGAGCCTCCGGGATCGTCTCCGACACTAGTTAGCGTGCGGCTGTCTC107120.12957656454447947No Hit
CCCCGGAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGACG104510.12641940590499953No Hit
CCCGGAGCAGATTACGCTCCGACGTACCAGATTACGCTCCGACGTACCAG103340.12500412789419815No Hit
TCCCGGAGAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGA102100.12350417513061383No Hit
CCCGGAGCCCAGATTACGCTCCGGGATCGTCTCCGACACTAGTTAGCGTG101580.12287516268136879No Hit
CCCGGAGCGTACCAGATTACGCTCCGGCGACGTACCAGATTACGCTCCGG95220.11518185657137167No Hit
CCCGGAGCGGGCGACGTACCAGATTACGCTCCGGGCGACGTACCAGATTA91150.11025862451670373No Hit
CCGGAGCGGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGAC82700.10003717221647172No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)