FastQCFastQC Report
Fri 1 Sept 2023
SRR13808051_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13808051_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16265389
Total Bases435.1 Mbp
Sequences flagged as poor quality0
Sequence length20-50
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTGGTCCGATGGTAGTGGGTTATCAGAACT433790.2666951279185515No Hit
GCGGGGATGGCGGAATTGGCAGACGCGCAGGACT428090.2631907543065831No Hit
GCGTCTGTAGTCCAACGGTTAGGATAATTGC383100.23553079486755588No Hit
GAGAATTCCACGTTGTGGCCGTGGAGACCTGGGCT317720.19533501473589102No Hit
GCGGGGACGGCGGAATTGGCAGACGCGCAGGACT251400.15456132035944545No Hit
GGGGACGTAGCTCATATGGT231520.1423390488847208No Hit
TCCGTTGTAGTCTAGTTGGTC225550.13866867862797502No Hit
GGGTGTTTGGTCTAGTGGTATGATTCTCGCT187400.11521396752330977No Hit
TCCGTTGTAGTCTAGCTGGTCAGGATATTCGGCT184520.11344333664568367No Hit
TCCGTTGTAGTCTAGCTGGTCAGGATATTCGGC168540.10361879448441104No Hit
TCCGTTGTAGTCTAGCTGGTCAGGAT168120.1033605774814239No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)