FastQCFastQC Report
Fri 1 Sept 2023
SRR13808063_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13808063_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13583971
Total Bases362.2 Mbp
Sequences flagged as poor quality0
Sequence length20-50
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGAATTCCACGTTGTGGCCGTGGAGACCTGGGCT661880.487250745750267No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACT331400.2439640072847623No Hit
GAGAATTCCACGTTGTGGCCGTGGAGACCTGGGC290520.21386971453340115No Hit
CAGGATATTCGGCTCTCACCCGAAAGACCCGGGT231470.17039936260170166No Hit
GACGACTTGGCTCTTGTATCGATG192530.14173322366486207No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)