FastQCFastQC Report
Fri 1 Sept 2023
SRR13808066_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13808066_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19961191
Total Bases534.6 Mbp
Sequences flagged as poor quality0
Sequence length20-50
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTGGGCCGGCGGGGCTTGTGCGAAAGCTC5125782.5678728288307044No Hit
CGTGAAACCGTGCTGAGCTCCCAAGC2448361.2265600785043338No Hit
GTGAAACCGTGCTGAGCTCCCAAGC2066881.0354492374728541No Hit
AGTGGGCCGGCGGGGCTTGTGCGAAAGCTC1415060.7089055958634933No Hit
TGAAACCGTGCTGAGCTCCCAAGC895670.4487056909580195No Hit
AGAACGTGAAACCGTGCTGAGCTCCC761860.3816706127404923No Hit
TAGTGGGCCGGCGGGGCTTGTGCGAAAGCTC581010.2910698064058402No Hit
AGCACATGACGAAGTGAGCGGGCTCT575650.288384595889093No Hit
AACCGTGCTGAGCTCCCAAGC546270.2736660352581166No Hit
GAAACCGTGCTGAGCTCCCAAGC514480.25774013183882666No Hit
TCCGTTGTAGTCTAGCTGGTTAGGATACTC446310.22358886300922623No Hit
AAACCGTGCTGAGCTCCCAAGC438400.21962617360857875No Hit
AGAACGTGAAACCGTGCTGAGCTCCCAAGC413510.2071569777574895No Hit
CGTGCTGAGCTCCCAAGCAGTGGGAGGGGAA310940.1557722682980189No Hit
GTGGGCCGGCGGGGCTTGTGCGAAAGCTC258660.12958144631750682No Hit
CGTGAAACCGTGCTGAGCTCCCA258350.12942614496299343No Hit
ACCGTGCTGAGCTCCCAAGC250220.1253532416978526No Hit
TCCGTTGTAGTCTAGCTGGTTAGGATACT224790.11261352090664328No Hit
TTGTCGTCTAGTCCGGTTAGGATACCTGG207300.1038515186794215No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACT207020.10371124648824812No Hit
GCCGCCATGGTGAAATTGGTAGACACGCTG203870.10213318433754778No Hit
TCCGTTGTAGTCTAGCTGGTTAGGAT200340.10036475278454077No Hit

[OK]Adapter Content

Adapter graph