FastQCFastQC Report
Fri 1 Sept 2023
SRR13808069_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13808069_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13968908
Total Bases364.9 Mbp
Sequences flagged as poor quality0
Sequence length20-50
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCAGGATAGCTCAGTTGGTAGAGC1475781.0564748511479922No Hit
TCCGTTGTAGTCTAGCTGGTTAGGATACTC853240.6108136727652584No Hit
TCCGTTGTAGTCTAGCTGGTTAGGAT656120.46970028007915865No Hit
GTGAAACCGTGCTGAGCTCCCAAGC650840.465920457060781No Hit
GTAGTGGGCCGGCGGGGCTTGTGCGAAAGCTC520950.372935379057547No Hit
CGTGCTGAGCTCCCAAGCAGTGGGAGGGGAA466250.3337769852876116No Hit
AGTGGGCCGGCGGGGCTTGTGCGAAAGCTC418020.2992503064663322No Hit
AGGGCTATAGCTCAGTTCGGTAGAGC364610.2610153921838414No Hit
GCCCGTCTAGCTCAGTCGGTAGAGC311560.22303819310714912No Hit
GCGAGCGTAGTTCAATGGTAAAAC301150.21558592840614316No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACT245350.1756400715073791No Hit
GCCGCCATGGTGAAATTGGTAGACACGCTG223090.15970468128217324No Hit
TAGTGGGCCGGCGGGGCTTGTGCGAAAGCTC207250.14836521222704022No Hit
AGCACATGACGAAGTGAGCGGGCTCT202120.1446927705444119No Hit
TCCGTTGTAGTCTAGCTGGTTAGGATACT176770.12654532480276912No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)