FastQCFastQC Report
Fri 1 Sept 2023
SRR13808071_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13808071_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7883681
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length158
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTCTCTCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCTTATACA1828352.319157763993749No Hit
CCTGTCTCGCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCTTATAC828061.0503469128190244No Hit
GCTGTCTCCCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCTTATAC684500.8682492353508469No Hit
CCCGGAGCAGATTACGCTCCGGGCCTTGGAACGACACTAGTTAGCGTGCG534290.6777164119146881No Hit
CCCCTGTCGGGCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCTTAT423970.5377817798563894No Hit
CCCGGAGCCTCCGGGCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTC358730.4550285583599844No Hit
CCCGGCTGCCGGGCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCTT332960.4223407821803038No Hit
TCTGTCTCACCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCTTATAC316570.4015510013659863No Hit
CCCGGAGCCCAGATTACGCTCCGGGCCTTGGAACGACACTAGTTAGCGTG310050.3932807529883566No Hit
CCCTGTCTGGCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCTTATA250600.31787181647760737No Hit
CCCGGAGCGATTACGCTCCGGGCCTTGGAACGACACTAGTTAGCGTGCGG215770.2736919466934291No Hit
ACTGTCTCTCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCTTATAC153550.19476942306518996No Hit
CCCGGAGCGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCG136490.17312978543906077No Hit
CCCCGGAGAGATTACGCTCCGGGGCCTTGGAACGACACTAGTTAGCGTGC131140.1663436153745947No Hit
TCCCGGCTCCGGGACCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCT129060.16370525392897048No Hit
CCCCGGAGCTCCGGGGCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCT123860.15710935031491No Hit
CCCCGGCTCCGGGGCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTCT119890.15207363159417536No Hit
CCCGGAGCGCTCCGGGCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCT98850.12538559081728445No Hit
TCCCGGAGCTCCGGGACCTTGGAACGACACTAGTTAGCGTGCGGCTGTCT97600.12380003706390455No Hit
CCCGGAGCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGA92330.11711534243965477No Hit
TCCCGGAGAGATTACGCTCCGGGACCTTGGAACGACACTAGTTAGCGTGC90140.11433745226373314No Hit
CCTGGAGCCTCCAGGCCTTGGAACGACACTAGTTAGCGTGCGGCTGTCTC87510.11100144716662179No Hit
CCCGGAGCATTACGCTCCGGGCCTTGGAACGACACTAGTTAGCGTGCGGC82130.10417722381207459No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)