FastQCFastQC Report
Fri 1 Sept 2023
SRR13808073_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13808073_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12659091
Total Bases327.9 Mbp
Sequences flagged as poor quality0
Sequence length20-50
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGATGTCGTCCAGCGGTTAGGATATCTGGC782630.618235543136549No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACT771130.6091511625913741No Hit
AGTGGGCCGGCGGGGCTTGTGCGAAAGCTC393670.3109780947146995No Hit
TCCGATGTCGTCCAGCGGTTAGGATATCTGGCT208650.1648222609348491No Hit
GCCCAGGTGGCGGAATTGGTAGACGC187230.14790161473679272No Hit
GTGGGCCGGCGGGGCTTGTGCGAAAGCTC174240.13764021445141678No Hit
CGTGCTGAGCTCCCAAGCAGTGGGAGGGGAA154450.12200718045237213No Hit
GTGAAACCGTGCTGAGCTCCCAAGC145570.1149924587792283No Hit
GCCCAGGTGGCGGAATTGGTAGACG143500.11335727028109681No Hit
TCCGTTGTAGTCTAGCTGGTTAGGAT140360.11087683941919683No Hit
GGGGCTATAGCTCAGCTGGTAGAGCGCTTGAAT136080.10749586996412301No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)