FastQCFastQC Report
Fri 1 Sept 2023
SRR13808082_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13808082_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7096557
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length158
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTGTCGGGATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTTAT644220.9077923280261118No Hit
CCCTGTCTGGATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTTATA622740.8775241289543647No Hit
CCTGTCTCGATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTTATAC491890.6931389404749373No Hit
CCCGGAGCAGATTACGCTCCGGGATTAGCCGCGACACTAGTTAGCGTGCG298680.4208801535730637No Hit
CCCGGCTGCCGGGATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTT241130.33978448985895554No Hit
CCCGGAGCCCAGATTACGCTCCGGGATTAGCCGCGACACTAGTTAGCGTG170130.2397359733741306No Hit
GCTGTCTCCATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTTATAC156000.21982490945961541No Hit
ACCTGTCTGTATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTTATA125280.17653631190449115No Hit
CCCGGAGCCTCCGGGATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTC124180.17498626446599386No Hit
CCCCCTGTGGGGATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTTA111900.15768209851622414No Hit
TCCCCTGTGGGAATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTTA87370.12311604063773461No Hit
CCCGGAGCGATTACGCTCCGGGATTAGCCGCGACACTAGTTAGCGTGCGG84750.11942410946604108No Hit
AGCTGTCTCTATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTTATA77170.10874287348075974No Hit
CCCCGGAGAGATTACGCTCCGGGGATTAGCCGCGACACTAGTTAGCGTGC73160.10309224600041965No Hit
CCCCGGCTCCGGGGATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCT72990.10285269321447005No Hit
TCCCTGTCGGAATTAGCCGCGACACTAGTTAGCGTGCGGCTGTCTCTTAT71990.10144355917947251No Hit
CCCGGAGCGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCG71920.1013449197970227No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)