FastQCFastQC Report
Fri 1 Sept 2023
SRR13808102_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13808102_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8672306
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length158
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCGGAGCGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCG232170.26771426192756576No Hit
CCCGGAGCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGA216440.2495760643132288No Hit
CCCGGAGCGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGAC145970.16831740023933656No Hit
CCCGGAGCACGTACCAGATTACGCTCCGGGCGACGTACCAGATTACGCTC131680.15183966063928095No Hit
CCCGGAGCATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGCGACG121730.14036635699893432No Hit
CCCGGAGCCCAGATTACGCTCCGGGCGACGTACCAGATTACGCTCCGGGC90030.10381321876788019No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)