FastQCFastQC Report
Thu 29 Jun 2023
SRR1382095.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1382095.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36926595
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length40-51
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAA7540742.042089177190586No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAA3245330.8788598028060806No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGAAAAAAAAAA2602540.7047874303059894No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAA2333390.6318995834844777No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAA1995650.5404370481491727No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGAAAAAAAAAA1756870.47577362602752843No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAA1700220.4604323794273477No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAA1568200.42468036925690006No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAA1426030.38617966265235126No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACAAAAAAAA1399680.3790438842249062No Hit
GGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA1214010.32876305004563783No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCAAAAAAA1145850.3103048087699394No Hit
GCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGAAAAAAAA1113150.3014494025241158No Hit
GGGGGGGGGATGCGTGCATTTATCAGATAAAAAAAAAAAA1068040.28923327482536637No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCAAAAAA1001840.2713058163093564No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAA982260.2660034048630804No Hit
GCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTAAAAAAA980250.2654590817268692No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAAAAAAAAAAAA939340.2543803456560238No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGACAAAAAAAA902210.24432526205029192No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGAAAAAAAAAA891050.24130305001043287No Hit
GGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAA867700.23497969417434778No Hit
GCCTCGGTTGGCCCCGGATAGCCGGGTCCCCAAAAAAAAA785310.21266786174029853No Hit
GGGGGGGGATGCGTGCATTTATCAGATAAAAAAAAAAAAA782250.2118391906971114No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGAAAAAAAAAA779360.21105655693410127No Hit
AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGCAAAAAAAAA774020.20961044472148058No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAA769600.20841347543687685No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAA738910.2001023923272644No Hit
GCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCGAAAA693670.1878510596495561No Hit
GGGGCTCTCGCTTCTGGCGCCAAGCGTCCGAAAAAAAAAA670630.18161165414791156No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCCGAAAAA652070.1765854663826979No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAAAAAAAAAAAA647390.17531808714017635No Hit
GCCTCGGTTGGCCCCGGATAGCCGGGTCCCAAAAAAAAAA630870.17084434673708745No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACAAAAAAAA616050.16683097913576922No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTAAAAAAAA615720.16674161265071963No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCCAAAAAAAA566580.15343413060424335No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAA554360.15012486258210378No Hit
GGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAAAA534360.14470871197303734No Hit
ATGCGTGCATTTATCAGATCAAAACCAAAAAAAAAAAAAA518470.14040558031413403No Hit
CCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAA509500.13797643676596774No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAA487690.13207012452678077No Hit
GGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAA476600.12906686901405343No Hit
TTGCGTGCATTTATCAGATCAAAACCAAAAAAAAAAAAAA467580.12662418508936446No Hit
GGAGCCTCGGTTGGCCCCGGATAGCCGGGTCCCAAAAAAA452270.12247812179812408No Hit
TGCGTGCATTTATCAGATCAAAACCAAAAAAAAAAAAAAA432740.11718925072837072No Hit
GCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGTCAAAAAA424750.11502549856004865No Hit
CTCGACTGCATAATTTGTGGTAGTGGGGGAAAAAAAAAAA420690.11392601998640817No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGAAAAAAAAAAAA419060.11348460371176924No Hit
GCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAA406750.11015096301188886No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA397740.10771098716250442No Hit
GGGGGGGGGGATGCGTGCATTTATCAGATAAAAAAAAAAA396080.1072614466619519No Hit
GGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAAA375930.10180467492331748No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGAAAAAAAAA370370.100298985053997No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)