FastQCFastQC Report
Thu 7 Sept 2023
SRR13919657_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919657_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6663146
Total Bases206.7 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGATATAAAGCTTATGTTTATATA718741.0786796507235472No Hit
TGGATATAAAGCTTATGTTTATATA266320.39969107685768857No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGAT150290.2255541151281992No Hit
TTGGATATAAAGCTTATGTTTATATAT130900.19645374722390896No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT116300.17454217572299932No Hit
ATATATAAGTATATAAAGAGACTACTACC88110.13223483321542107No Hit
GGGGTACTCAGACGGAAAAATTCGCCCAAA84140.1262766867182559No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)