FastQCFastQC Report
Wed 6 Sept 2023
SRR13919658_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919658_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6150898
Total Bases191.6 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGATATAAAGCTTATGTTTATATA639521.0397181029501708No Hit
TGGATATAAAGCTTATGTTTATATA236380.3843016092934723No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGAT140340.2281618066175053No Hit
TTGGATATAAAGCTTATGTTTATATAT117720.19138668857783042No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT108110.17576295363701366No Hit
GGGGTACTCAGACGGAAAAATTCGCCCAAA84950.13810991500753225No Hit
ATATATAAGTATATAAAGAGACTACTACC80860.13146047942918251No Hit
TCTAGAGGGAATTAGAATATAATAAGGAT61610.10016423618144862No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)