FastQCFastQC Report
Thu 7 Sept 2023
SRR13919659_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919659_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6700731
Total Bases189.9 Mbp
Sequences flagged as poor quality0
Sequence length20-68
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCTAGAGGGAATTAGAATATAATAAGGAT233950.3491410116299251No Hit
TGGTGATTAATAATAACTTATCGAATCGCA151080.22546793775186616No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTGCGTCATT123250.18393515573151648No Hit
TGGTGATTAATAATAACTTATCGAATCGCAT113420.16926511450765597No Hit
TAGAGGGAATTAGAATATAATAAGGAT85940.12825466355834908No Hit
CCCCCACAACGGAAGGGGTGTATTTATTATA83490.12459834606104916No Hit
TGGATATAAAGCTTATGTTTATATA76840.11467405571123508No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)