FastQCFastQC Report
Thu 7 Sept 2023
SRR13919660_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919660_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7107195
Total Bases216.1 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGATATAAAGCTTATGTTTATATA2722263.830287476282837No Hit
TGGATATAAAGCTTATGTTTATATA424770.5976619468017973No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGAT347220.48854716945292764No Hit
TTGGATATAAAGCTTATGTTTATATAT208360.2931676983676401No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT182260.25644434970477104No Hit
AAATTCTGTATACATATTGATAATGACAATATGT170080.2393067869954321No Hit
TAAGGCTGTGTTCAGGTCGCAGTC137710.1937613925043565No Hit
TCTAGAGGGAATTAGAATATAATAAGGAT136120.19152422298811275No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGA113880.16023199025775992No Hit
ATATATAAGTATATAAAGAGACTACTACC112380.15812145297828467No Hit
ATATATATAAGTATATAAAGAGACTACTACC103610.14578184501761948No Hit
GGGGTACTCAGACGGAAAAATTCGCCCAAA93920.13214777419220944No Hit
TAAGGCTACGTTGAGGCCGTAGTC90390.1271809764611777No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCA80810.11370167836959588No Hit
TTTACCTTAAGATATTTCTTAAATATACGTAAG75360.10603339292083586No Hit
ATGGATATAAAGCTTATGTTTATATA73530.10345853743987607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)