FastQCFastQC Report
Thu 7 Sept 2023
SRR13919661_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919661_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7562133
Total Bases247.2 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGATATAAAGCTTATGTTTATATA2251212.976951079807774No Hit
TGGATATAAAGCTTATGTTTATATA343510.4542501434449777No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGAT291700.3857377277019592No Hit
TTGGATATAAAGCTTATGTTTATATAT175770.23243442028856146No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT154720.20459835869059695No Hit
TAAGGCTGTGTTCAGGTCGCAGTC147050.19445571771879708No Hit
AAATTCTGTATACATATTGATAATGACAATATGT123120.16281120683807068No Hit
TCTAGAGGGAATTAGAATATAATAAGGAT114810.15182224380343481No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGA97760.12927569509819517No Hit
ATATATAAGTATATAAAGAGACTACTACC95510.12630034409603746No Hit
TAAGGCTACGTTGAGGCCGTAGTC91420.1208918171632263No Hit
ATATATATAAGTATATAAAGAGACTACTACC87280.11541717131925608No Hit
GGGGTACTCAGACGGAAAAATTCGCCCAAA85280.11277241487289366No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)