FastQCFastQC Report
Thu 7 Sept 2023
SRR13919663_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919663_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3809416
Total Bases119.5 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGATATAAAGCTTATGTTTATATA326380.85677174664043No Hit
TGGATATAAAGCTTATGTTTATATA134370.3527312322938739No Hit
ATATATAAGTATATAAAGAGACTACTACC92810.24363314481799836No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGAT83980.2204537388408092No Hit
ATATATATAAGTATATAAAGAGACTACTACC69980.18370269878637566No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT62710.16461840870096625No Hit
TCTAGAGGGAATTAGAATATAATAAGGAT49950.13112246076563966No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCA49830.13080745185088738No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGA48190.12650233001593944No Hit
GGGGTACTCAGACGGAAAAATTCGCCCAAA42920.11266818850973483No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)