FastQCFastQC Report
Thu 7 Sept 2023
SRR13919667_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919667_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7423340
Total Bases220.4 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGATATAAAGCTTATGTTTATATA2582143.4784072937518693No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGAT287830.38773651752445665No Hit
TTGGATATAAAGCTTATGTTTATATAT278540.37522193513970803No Hit
TGGATATAAAGCTTATGTTTATATA188270.25361899091244644No Hit
ATATATATAAGTATATAAAGAGACTACTACC178980.2411044085276978No Hit
ATATATAAGTATATAAAGAGACTACTACC177740.23943400140637502No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT162880.219416058000846No Hit
TCTAGAGGGAATTAGAATATAATAAGGAT133830.18028272987630906No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGA119980.16162536001314773No Hit
TAAGGCTGTGTTCAGGTCGCAGTC116580.15704521145468212No Hit
ATGGATATAAAGCTTATGTTTATATA104360.14058361869454988No Hit
ATATATAAGTATATAAAGAGACTACTACCA103360.1392365161773541No Hit
ATATATATAAGTATATAAAGAGACTACTACCA92650.1248090482181875No Hit
GGGGTACTCAGACGGAAAAATTCGCCCAAA82570.11123025484485421No Hit
TTTAACTTAAAGTGAAGGCAAATCCTT75730.1020160736272352No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)