FastQCFastQC Report
Thu 7 Sept 2023
SRR13919669_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919669_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8675469
Total Bases285.6 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTAGAGGGAATTAGAATATAATAAGGAT637330.7346346347384793No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT267420.30824846472277173No Hit
ATATATATAAGTATATAAAGAGACTACTACC213160.2457042956409619No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTGAGCGTCATT207420.2390879386463141No Hit
TCTAGAGGGAATTAGAATATAATAAGGAT205730.23713991716182722No Hit
TTTCTAGAGGGAATTAGAATATAATAAGGA191650.2209102470425518No Hit
TTTACCTTAAGATATTTCTTAAATATACGTAAG172680.19904399404804515No Hit
AAATTCTGTATACATATTGATAATGACAATATGT153600.1770509467557316No Hit
ACGACCAGCGAATCCCTGGTGTTGTATGTGTCATT135900.15664859156317656No Hit
TTTCTGGCGTGCATGCCTGTTCGAGCGTCATT130210.15008986834025917No Hit
TTGGATATAAAGCTTATGTTTATATA112170.12929560349993757No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCGAGCGTCATT110130.12694414561333803No Hit
GGGGTACTCAGACGGAAAAATTCGCCCAAA108370.1249154368484286No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTGCGTCATT103510.11931343423623553No Hit
ATATATATAAGTATATAAAGAGACTACTACCA97330.11218990005036039No Hit
ATATATAAGTATATAAAGAGACTACTACC93410.1076714123466985No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCATT91350.10529690095140679No Hit
TCTGGCGAGCATGCCTATTCGAGAGTCATT89900.10362552157122572No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTGAGCGTCATT87380.1007207794760145No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)