FastQCFastQC Report
Thu 7 Sept 2023
SRR13919673.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919673.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7610950
Total Bases246.4 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACATTAAGACGACCTCTTCTTCAAATCT284370.37363272653216745No Hit
ATAGATAAGCCAGTGAGGGCCAGACTAGT196840.2586273724042334No Hit
AACTTCTCGAATCGCATGGCGAGCATGCCTGTTCGAGCGTCATT194520.25557913269696947No Hit
ATTAAGACGACCTCTTCTTCAAATCT192600.25305645155992357No Hit
ACATACGACCATACCCACTGGAAAACTC154070.20243202228368337No Hit
AGATAAGCCAGTGAGGGCCAGACTAGT134660.17692929266385932No Hit
AAGACGACCTCTTCTTCAAATCT124720.16386916219394426No Hit
ATATATAAGTATATAAAGAGACTACTACC104500.1373021764694289No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCA87340.11475571380708059No Hit
ATATATAAGTATATAAAGAGACTACTACCA78850.10360073315420545No Hit
ACATTAAGACGACCTCTTCTTCAAATCT76160.10006635176949001No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)