FastQCFastQC Report
Thu 7 Sept 2023
SRR13919674_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919674_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4856145
Total Bases154 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACATTAAGACGACCTCTTCTTCAAATCT190680.39265713853272505No Hit
ATTAAGACGACCTCTTCTTCAAATCT145670.29997044981152743No Hit
ATAGATAAGCCAGTGAGGGCCAGACTAGT128010.2636041551477561No Hit
ACATACGACCATACCCACTGGAAAACTC99860.20563636382356787No Hit
AGATAAGCCAGTGAGGGCCAGACTAGT99730.20536866176771906No Hit
AACTTCTCGAATCGCATGGCGAGCATGCCTGTTCGAGCGTCATT97150.20005580558241157No Hit
AAGACGACCTCTTCTTCAAATCT80440.1656457951729201No Hit
TTTCTGGCGTGCATGCCTGTTCGAGCGTCATT73710.1517870656662847No Hit
TCTGGCGAGCATGCCTATTCGAGAGTCATT70050.14425022317084848No Hit
ATATATAAGTATATAAAGAGACTACTACC64520.1328625895643561No Hit
ACATACGACCATACCCACTGGAAAACTCGGGATC52800.10872821960629264No Hit
ACATTAAGACGACCTCTTCTTCAAATCT51360.10576290452612101No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCA51150.105330462743596No Hit
ATATATAAGTATATAAAGAGACTACTACCA50340.10366247301099947No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)