FastQCFastQC Report
Thu 7 Sept 2023
SRR13919675_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919675_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2089768
Total Bases67.7 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACATTAAGACGACCTCTTCTTCAAATCT83460.3993744760183906No Hit
ATTAAGACGACCTCTTCTTCAAATCT57450.274910899200294No Hit
ATAGATAAGCCAGTGAGGGCCAGACTAGT56900.27227902810264104No Hit
AACTTCTCGAATCGCATGGCGAGCATGCCTGTTCGAGCGTCATT47180.22576668797684718No Hit
ACATACGACCATACCCACTGGAAAACTC45820.21925878853537809No Hit
AGATAAGCCAGTGAGGGCCAGACTAGT43520.20825278212701126No Hit
ATATATAAGTATATAAAGAGACTACTACC36940.1767660333587269No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCA29510.1412118474395244No Hit
AAGACGACCTCTTCTTCAAATCT29440.14087688202709583No Hit
ATATATAAGTATATAAAGAGACTACTACCA29180.1396327247809326No Hit
ACATACGACCATACCCACTGGAAAACTCGGGATC24600.11771641636774992No Hit
ACATTAAGACGACCTCTTCTTCAAATCT21920.10489202629191374No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT21400.10240371179958732No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)