FastQCFastQC Report
Thu 7 Sept 2023
SRR13919676.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919676.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16787554
Total Bases548.8 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAACGGATCTAAATAATATACCGAAACCTTGTCCA436300.25989491977211215No Hit
ATACATTAAGACGACCTCTTCTTCAAATCT359770.21430757571948839No Hit
AGATAAGCCAGTGAGGGCCAGACTAGT256480.15277985107300324No Hit
ATATATAAGTATATAAAGAGACTACTACC254520.15161231945999995No Hit
ACATACGACCATACCCACTGGAAAACTC247310.1473174710264521No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCAT239160.14246268396217815No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT233670.13919240408698016No Hit
ATAGATAAGCCAGTGAGGGCCAGACTAGT224130.13350962266450492No Hit
ATATATAAGTATATAAAGAGACTACTACCA194260.11571667915409238No Hit
AACTTCTCGAATCGCATGGCGAGCATGCCTGTTCGAGCGTCATT189920.1131314305824422No Hit
ACATACGACCATACCCACTGGAAAACT188680.1123927881333993No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)