FastQCFastQC Report
Thu 7 Sept 2023
SRR13919679.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919679.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8358879
Total Bases271.8 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACATTAAGACGACCTCTTCTTCAAATCT489350.5854253901749266No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCA292550.34998712147884903No Hit
AAGACGACCTCTTCTTCAAATCT190300.22766210636617662No Hit
ATAGATAAGCCAGTGAGGGCCAGACTAGT159120.19036045383597489No Hit
ACATACGACCATACCCACTGGAAAACTC139890.1673549766661295No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCAT139190.1665175437998325No Hit
AACTTCTCGAATCGCATGGCGAGCATGCCTGTTCGAGCGTCATT127180.15214958847950785No Hit
ATATATAAGTATATAAAGAGACTACTACCA125100.14966121653393955No Hit
ATATATAAGTATATAAAGAGACTACTACC118520.14178934759074752No Hit
ACATACGACCATACCCACTGGAAAACTCGGGATCC113280.13552056442018123No Hit
ACATACGACCATACCCACTGGAAAACTCGGGATC107760.12891680810309614No Hit
ATTAAGACGACCTCTTCTTCAAATCT102430.12254035499257734No Hit
AGATAAGCCAGTGAGGGCCAGACTAGT91540.10951229225832793No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT88740.10616256079313985No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)