FastQCFastQC Report
Thu 7 Sept 2023
SRR13919680_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13919680_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4539080
Total Bases146 Mbp
Sequences flagged as poor quality0
Sequence length20-67
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACATTAAGACGACCTCTTCTTCAAATCT266350.5867929183887484No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCA146020.3216951452717291No Hit
AAGACGACCTCTTCTTCAAATCT100910.22231377283502382No Hit
ATAGATAAGCCAGTGAGGGCCAGACTAGT87470.19270424843800948No Hit
ACATACGACCATACCCACTGGAAAACTC74580.1643064233280753No Hit
TAACGGATCTAAATAATATACCGAAACCTTGTCCAT68210.15027274249407369No Hit
ATATATAAGTATATAAAGAGACTACTACCA66030.14547000713801034No Hit
ACATACGACCATACCCACTGGAAAACTCGGGATCC62600.13791340976585564No Hit
ACATACGACCATACCCACTGGAAAACTCGGGATC59250.13053305956273079No Hit
AACTTCTCGAATCGCATGGCGAGCATGCCTGTTCGAGCGTCATT58650.12921120579500692No Hit
ATATATAAGTATATAAAGAGACTACTACC58430.12872652608017485No Hit
TTTCTGGCGTGCATGCCTGTTCGAGCGTCATT55170.12154445394220856No Hit
ATTAAGACGACCTCTTCTTCAAATCT53250.1173145218854922No Hit
AGATAAGCCAGTGAGGGCCAGACTAGT50620.11152039620363598No Hit
TTCTAGAGGGAATTAGAATATAATAAGGAT47430.1044925403385708No Hit
TCTGGCGAGCATGCCTATTCGAGAGTCATT45830.10096759695797386No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)