FastQCFastQC Report
Thu 14 Sept 2023
SRR13998265.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13998265.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57680212
Total Bases8.6 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG9668881.6762906488623865No Hit
GGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG6605861.1452558461470288No Hit
CCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG5363540.9298752230661012No Hit
CCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG5342530.9262327260517003No Hit
GCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG3745570.6493682790208886No Hit
GGGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAA3633850.6299994181713479No Hit
GGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAA3601550.624399577449542No Hit
CGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG3585480.6216135266631821No Hit
CGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCGG3244700.5625326065029026No Hit
GCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG3087840.5353378382173769No Hit
CGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACGT2555310.4430132815739304No Hit
CCGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAA2332580.4043986523489199No Hit
CCGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAA2317130.4017200907652697No Hit
GGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACGT2207510.38271530624748745No Hit
CCGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC2079020.3604390358343343No Hit
GGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACAC2075260.3597871658308052No Hit
CCGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC2063710.35778474600613464No Hit
GGGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC2032890.3524414924133774No Hit
CGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG1996740.34617417841668124No Hit
GCGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAA1921010.3330448924147505No Hit
CCGATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1780850.30874539781511207No Hit
CGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAA1737490.3012280884127125No Hit
CCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1713780.2971174932574797No Hit
GCGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAA1706240.2958102858567857No Hit
CGGATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1659540.28771392171720866No Hit
GGGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1588820.2754532178210441No Hit
CGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1588390.2753786688578745No Hit
GGGATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1560820.27059886673093364No Hit
CGGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAA1530490.26534056428225333No Hit
GGGGGAGCGTTTACTTCGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1526920.26472163451826425No Hit
CGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1517820.26314397041397836No Hit
GGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGT1493620.2589484241146686No Hit
CGGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1470480.25493664967805596No Hit
CGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG1424070.24689056274619794No Hit
CCGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA1420300.24623695904585097No Hit
CGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAAG1394220.24171547774477667No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA1329610.23051406260434687No Hit
CCGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1294210.22437677586899302No Hit
CCGCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCG1274660.22098739859000519No Hit
GCGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC1263320.21902138639851046No Hit
GGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAAA1248390.21643297704939088No Hit
GGGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAA1246490.21610357465399055No Hit
GCGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1226500.21263791471501525No Hit
CCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG1221370.21174852824743431No Hit
CCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGT1195740.2073050633031654No Hit
CGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1192160.20668439984235842No Hit
GGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1169000.20266915801210994No Hit
GGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1140150.19766744269247832No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA1116450.19355858123406344No Hit
GGGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA1114720.19325865168456732No Hit
CCGGGAGCGTTTACTTCGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1113340.1930194015236976No Hit
GCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG1092530.18941157844565482No Hit
GCGATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1056530.18317026990122715No Hit
CGGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC1052130.18240744330135264No Hit
CGGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA1038350.18001840908629116No Hit
CCCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC1024820.17767271729167708No Hit
GCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACAC986170.17097197909050682No Hit
GGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG977520.16947233134302625No Hit
GGGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA965250.16734508534746717No Hit
CCCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA959280.1663100683471829No Hit
GGGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG957750.16604481273404473No Hit
GCCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA945180.16386555583394874No Hit
CGGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA938390.16268837569459696No Hit
GCGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA923480.16010343373911315No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGGAA908930.15758090486907364No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGAAA903210.1565892302892368No Hit
CGCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC870420.15090443842335394No Hit
CGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACACG833690.14453657001121978No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGGCA800390.13876335960762418No Hit
CGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGT797400.1382449842590731No Hit
CGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA797060.13818603856726464No Hit
CCGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAA797020.13817910377999304No Hit
CCGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAAA790080.13697591818837282No Hit
CCCCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA785840.13624083073758467No Hit
GGCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC784280.1359703740339928No Hit
CGGGGAGCGTTTACTTCGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG783290.13579873804902104No Hit
GCGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA781440.13547800413771016No Hit
GGGGGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAA777760.13484000370872423No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGAAA755020.13089757714482742No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGGAA753490.13063232153168924No Hit
GGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAG752820.13051616384489015No Hit
GCGCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCG751540.1302942506521994No Hit
GCGGGAGCGTTTACTTCGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG716940.12429565966227724No Hit
CCCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA712580.12353976784967434No Hit
GGGCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCG705740.1223539192262331No Hit
GGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACACG705040.12223256044898033No Hit
CCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACGT696000.12066529852560182No Hit
GCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGT683000.11841149266233626No Hit
CGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAAAA679110.11773708460017449No Hit
CCGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACA666530.1155560940032606No Hit
GCGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAA665240.11533244711375194No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGGCA663300.11499610993107999No Hit
GCCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC662280.11481927285565455No Hit
GCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA657480.1139870983830642No Hit
CCGCGCGCCCCATTGAATACCCCAGCTAGGAAAAAAAAAAAAAAAGATCG652980.11320693481501073No Hit
CGGCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCG646930.11215804824018331No Hit
CGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAAA644900.11180610778615031No Hit
GGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAAAAAAAAAAAAAAAGAT633920.10990250868009988No Hit
CCGGGGGTGGGTACCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAA630740.10935119309200875No Hit
CCCCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC622130.10785848013179979No Hit
GCCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA619170.10734530587370239No Hit
CCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCGG616070.10680785986015447No Hit
GGGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA615550.10671770762562384No Hit
GCGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAAA605040.10489559227001453No Hit
GGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCGG604530.10480717373230182No Hit
CGCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA604000.1047152878009533No Hit
CGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGTC598880.10382763503019025No Hit
CCGATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGAAAAAAA594730.10310815085076318No Hit
CCCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGA589810.10225517201635805No Hit
CCGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGA588440.10201765555230623No Hit
CGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAA583250.1011178669038179No Hit
CGCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA578370.10027182285668437No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)