FastQCFastQC Report
Wed 6 Sept 2023
SRR13998266.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13998266.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55963048
Total Bases8.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG8208161.4667106766593556No Hit
GGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG7949981.4205766633725883No Hit
CCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG6392251.1422269208782194No Hit
CCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG4533480.8100845400700835No Hit
CGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG4274340.7637789850188289No Hit
GCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG3713310.6635289057165006No Hit
GGGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAA3441240.6149128975248096No Hit
GGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAA3363910.6010948510166922No Hit
GCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG3185420.5692005910757398No Hit
CGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACGT3156630.5640561250345049No Hit
GGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACGT2736850.4890459147257312No Hit
CGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCGG2723730.4867015106110732No Hit
GGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACAC2392190.4274588474880782No Hit
CCGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC2322900.4150774632575409No Hit
CCGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAA2147220.3836853203563894No Hit
CCGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAA2065830.36914179513596185No Hit
CCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1948900.34824765084274895No Hit
GGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGT1930640.34498478353073264No Hit
CGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1872040.33451358832349515No Hit
GGGGGAGCGTTTACTTCGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1827290.3265172404476611No Hit
GGGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1825520.3262009603193879No Hit
GCGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAA1788260.31954299558522975No Hit
CCGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC1732500.30957927809793345No Hit
GGGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC1701090.303966645991119No Hit
CGGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1660060.2966350224526727No Hit
CGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG1649350.29472125964261275No Hit
CGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAA1588760.2838944726527404No Hit
CCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGT1556100.2780584788734166No Hit
GCGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAA1546510.276344848121925No Hit
CCGATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1539880.2751601378109355No Hit
CGGATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1412720.25243800158990626No Hit
CGGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAA1404620.25099061795204575No Hit
GGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1390220.24841749148473827No Hit
CGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1377340.24611597281120212No Hit
GCGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1365330.24396991386173247No Hit
GGGATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA1347590.24079996500548004No Hit
CGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1335720.23867892256333145No Hit
CCGGGAGCGTTTACTTCGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG1324860.23673835635257037No Hit
CGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAAG1276370.2280737103525884No Hit
CGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG1234620.22061343049077667No Hit
CCGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA1219690.21794559867432525No Hit
GGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAAA1156440.20664349804535306No Hit
GGGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAA1145300.20465289881994989No Hit
CCGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1120670.20025178042482605No Hit
GCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACAC1116270.1994655473375932No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA1104770.19741061995050732No Hit
CCGCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCG1076530.19236443304517653No Hit
GCGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC1049100.18746298450363175No Hit
CCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG1042850.1863461761410851No Hit
CGGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGT1025360.18322089961933455No Hit
GGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA996930.1781407617397823No Hit
CGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACACG979910.17509946920689523No Hit
GGGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA954200.1705053663267233No Hit
GCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG937650.16754805778269977No Hit
CGGGGAGCGTTTACTTCGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG925610.16539663815308986No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA915940.1636687122545577No Hit
CGGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA900330.16087937168826116No Hit
GCGATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA900150.1608472076074198No Hit
GCGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGT877670.156830271289012No Hit
CCCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC874200.1562102192861261No Hit
CCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACGT873920.156160186271484No Hit
CGGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC855040.15278653156990304No Hit
GCGGGAGCGTTTACTTCGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG852430.15232015239770358No Hit
GGGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG852180.1522754800632017No Hit
GGGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA843190.1506690629145146No Hit
CGGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA836240.1494271720153627No Hit
CCCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA833740.14898044867034405No Hit
GGGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACACG831080.14850513503124418No Hit
GGCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG825760.14755450775304446No Hit
GCCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAAA815480.14571758135832774No Hit
CGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGTC793710.1418275144699052No Hit
GCGCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA770630.13770336454869292No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGAAA765480.13678311445795446No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGGAA762370.13622739061675126No Hit
GGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAAAAG760380.1358717988341164No Hit
GGGGGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAAAAAAAAAAAA748040.13366677240310426No Hit
CGCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC742150.1326142922022403No Hit
CCCCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC729350.13032706867574476No Hit
CCGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAA721120.1288564554239433No Hit
CCGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACA712630.12733938294425992No Hit
CCCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACACG701890.12542025945405977No Hit
CCGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAAA695760.124324893812074No Hit
GGGGAGCGTTTACTTTGAAAAAAAAAAAAAAGATCGGAAGAGCACACGTC689230.12315805243488524No Hit
CCCCATTGATCATCGACCTTTCGAACGCACATTGCGGCCCCGGGTAAAAA680320.12156593043323874No Hit
GGCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC668290.11941629769700891No Hit
GCGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA668060.11937519914926721No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGGCA667300.11923939525238154No Hit
CGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA656980.1173953212841445No Hit
GCGCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCG646410.1155065749814056No Hit
CGCCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAGATCGGAAGAGCACAC627020.11204178871744085No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGAAA626750.11199354259617883No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCGGAA626140.11188454209999427No Hit
GGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAAAAAAAAAAAAAAAGAT624690.11162544255988345No Hit
CCCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA622820.11129129349780949No Hit
CGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAAAA610990.10917739862918117No Hit
GGGCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCG609700.10894688938315154No Hit
GCGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAA606420.10836078835448706No Hit
CCGCGCGCCCCATTGAATACCCCAGCTAGGAAAAAAAAAAAAAAAGATCG595270.10636840223570382No Hit
CGCGGAGCGTTTACTTTGAAAAAAAAAAAAAAAAGATCGGAAGAGCACAC594780.10628084446008017No Hit
CGGGGCCCCCGGCGCGGAGAGCCATTCGTGACAGGAACAAAAAAAAAAAA579100.1034789956401231No Hit
GCCCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCC566130.10116139492616627No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)